Repositories list

• USBG_Hybrid_Acorns

  Public
  Analyzing the offspring of 11 Quercus muehlenbergii individuals at the Morton Arboretum for hybridization and predictors of pollination success.

  popgenhybrids

  HTML

  •2•0•0•0•Updated Nov 14, 2024Nov 14, 2024

• Salas_RaMP_ResamplingPredictionIntervals

  Public
  Generating confidences intervals around minimum sample size estimates

  R

  •

  MIT License

  •0•1•0•0•Updated Nov 7, 2024Nov 7, 2024

• QUBR_exsitu_gen_diversity

  Public
  R

  •0•0•0•0•Updated Nov 7, 2024Nov 7, 2024

• Morton_SSRvSNP_Simulations

  Public
  Scripts and parameters for generating/analyzing fastSimcoal2 simulations, as part of the IMLS_GCCO project comparing ex situ conservation measures between SNP and microsatellite marker types

  dna-sequencesmicrosatellite-datastratag

  R

  •1•0•0•0•Updated Oct 17, 2024Oct 17, 2024

• QUBR_GenGeoEcoDemoCorr

  Public
  Looking for correlations in the genetics, geography, ecology, and demographics of Quercus brandegeei

  R

  •1•0•0•0•Updated Oct 16, 2024Oct 16, 2024

• Ten_Oaks

  Public
  Genetic diversity and structure code for 10 species of rare and endangered oak species.

  geneticdiversityseedsourcing

  R

  •0•0•0•0•Updated Sep 12, 2024Sep 12, 2024

• Morton_SSRvSNP_Empirical

  Public
  Generation of RADseq markers for 2 rare Quercus spp., and how ex situ conservation measures with these markers compare to those generated with microsatellites

  rconservationstacks+ 3radseq-dataquercusexsitu

  HTML

  •0•0•0•0•Updated Jul 1, 2024Jul 1, 2024

• IMLS_GCC_QUAC_ZAIN

  Public
  An analysis of genetic diversity representation in botanic gardens of a rare oak species and a rare cycad species

  conservationgenetic-diversityconservation-genetics+ 1botanic-gardens

  R

  •0•1•0•0•Updated Jan 26, 2024Jan 26, 2024

• Pollen_dispersal_sims

  Public
  Simulating complex pollen dispersal and mating to Simcoal2 simulations

  R

  •2•0•0•0•Updated Nov 17, 2023Nov 17, 2023

• ggplot2_intro_and_walkthrough

  Public
  A short introduction to ggplot2

  HTML

  •0•0•0•0•Updated Sep 6, 2023Sep 6, 2023

• Butternut

  Public
  Identifying the influence of past range shifts of the rare butternut tree using genetic diversity, geographic locations, and species distribution modeling.

  diversitygeneticbutternut+ 2sdmssean-hoban

  R

  •0•1•0•0•Updated Jul 28, 2023Jul 28, 2023

• Morton-REU

  Public
  R

  •1•1•0•0•Updated Apr 23, 2023Apr 23, 2023

• Quercus_IUCN_samp_sims

  Public
  Repository storing code, simulation, and parameter files that represent IUCN Red List endangered oaks

  R

  •1•1•0•0•Updated Apr 23, 2023Apr 23, 2023

• Quercus_havardii_Safeguarding_genetic_diversity

  Public
  R

  •0•0•0•0•Updated Apr 20, 2023Apr 20, 2023

• Q_havardii_GeoEco_exsitu_conservation

  Public
  R

  •0•0•0•0•Updated Mar 17, 2023Mar 17, 2023

• .github

  Public
  Files for formatting public GH organization page

  0•0•0•0•Updated Mar 16, 2023Mar 16, 2023

• Qhavardii_ex_situ

  Public
  R

  •0•0•0•0•Updated Apr 7, 2022Apr 7, 2022

• QUHA_EW_Hyb

  Public
  Code for determining the history of the rare species, Quercus havardii, and possible parental hybrids

  R

  •0•0•0•0•Updated Dec 8, 2021Dec 8, 2021

• SE_oaks_genetics

  Public
  Population genetic analysis of southeastern oaks Q georgiana, boyntonii, oglethorpensis

  R

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Feb 15, 2021Feb 15, 2021

• Quercus_havardii_Forests_Manuscript

  Public
  Environmental analyses for Quercus havardii 2019 data

  R

  •0•1•0•0•Updated Jan 20, 2021Jan 20, 2021

• IMLS_Safeguarding

  Public
  Code and files for Safeguarding Plant Genetic Diversity Project

  R

  •0•0•0•0•Updated Mar 18, 2020Mar 18, 2020