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@NFDI4BIOIMAGE NFDI4BioImage

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    15 repositories

    • training

      Public
      Jupyter Notebook
      •
      Creative Commons Attribution 4.0 International
      •7•11•39•4•Updated Nov 19, 2024Nov 19, 2024

    • nfdi_search_engine

      Public
      search engine for the NFDI4BIOIMAGE materials(Docker Version)
      JavaScript
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•19•1•Updated Nov 19, 2024Nov 19, 2024

    • omero-vitessce

      Public
      OMERO.web plugin for the Vitessce multimodal data viewer.
      omeroomero-webmultimodalspatial-transcriptomicsvitesscespatial-omicsnfdi4bioimage
      Python
      •
      GNU Affero General Public License v3.0
      •0•4•0•0•Updated Nov 18, 2024Nov 18, 2024

    • SlideInsight

      Public
      A collection of notebooks for gaining insights into presentation slides through multimodal AI models.
      Jupyter Notebook
      •
      Creative Commons Attribution 4.0 International
      •0•3•2•0•Updated Nov 15, 2024Nov 15, 2024

    • search_engine

      Public
      search engine for the NFDI4BIOIMAGE materials
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•16•0•Updated Oct 8, 2024Oct 8, 2024

    • irods_k8s

      Public
      PLpgSQL
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Sep 4, 2024Sep 4, 2024

    • licensing

      Public
      0•0•1•0•Updated Jul 11, 2024Jul 11, 2024

    • FAIR-IO

      Public
      Jupyter Notebook
      •
      Creative Commons Attribution 4.0 International
      •0•0•0•0•Updated Jun 17, 2024Jun 17, 2024

    • napari-plugin-template

      Public
      MIT License
      •0•0•3•0•Updated May 28, 2024May 28, 2024

    • omero-tabbles

      Public
      OMERO.web script to create Annotations in OMERO based on Tags from Tabbles
      omeroomero-scripts
      Python
      •
      GNU General Public License v3.0
      •0•2•0•0•Updated Apr 23, 2024Apr 23, 2024

    • git-demo-dataweek2024

      Public
      This repository serves as playground for the DataWeek Leipzig 2024
      The Unlicense
      •8•0•0•0•Updated Apr 15, 2024Apr 15, 2024

    • omero-scripts

      Public
      OMERO.web script to convert grey scale label images into OMERO Rois
      omeroomero-scripts
      Python
      •
      GNU General Public License v2.0
      •1•3•0•0•Updated Apr 10, 2024Apr 10, 2024

    • Cologne-Hackathon-2023

      Public
      Repository for documentation during and of the NFDI4Bioimage - TA3-Hackathon - UoC-2023 (in short: "Cologne Hackathon").
      Creative Commons Attribution 4.0 International
      •0•1•0•0•Updated Feb 22, 2024Feb 22, 2024

    • omero-arc-activities

      Public
      This repository collects, links and describes omero-arc interoperability activities.
      Creative Commons Attribution 4.0 International
      •0•0•5•0•Updated Feb 6, 2024Feb 6, 2024

    • BHG2023-OMERO-ARC

      Public
      Python
      •
      Creative Commons Attribution 4.0 International
      •4•0•0•0•Updated Feb 5, 2024Feb 5, 2024