Repositories list

• RNAseq_2021Pyonema

  Public
  Code associated with Fischer, et al (2021) "Pyrolyzed Substrates Induce Aromatic Compound Metabolism in the Post-fire Fungus, Pyronema domesticum"

  rnaseqmetabolismfungi+ 1charcoal

  0•1•0•0•Updated Feb 22, 2023Feb 22, 2023

• BlodgettProject

  Public
  Code associated with the following manuscript, currently in review: M.S. Fischer, N.J. Patel, P.J. De Lorimier, M.F. Traxler "Prescribed fire selects for a pyrophilous soil subcommunity in a northern California mixed conifer forest"

  community-ecologyamplicon-sequencingprescribedfire+ 2its-sequence16s-seq

  R

  •0•0•0•0•Updated Feb 22, 2023Feb 22, 2023

• MS-DIALoutputDataFiltering_and_VennAnalysis

  Public
  R script for filtering the data output from MS-DIAL (i.e. remove features in blanks or extract controls), and then build and explore a presence/absence table for the features in each sample!

  R

  •0•0•0•0•Updated Sep 16, 2020Sep 16, 2020

• ColonyPigmentationImageAnalysis

  Public
  Swift

  •0•1•0•1•Updated Sep 2, 2020Sep 2, 2020