Repositories list

• methylSig

  Public
  R package for DNA methylation analysis

  dna-methylationdifferential-methylation

  R

  •5•17•8•0•Updated Aug 18, 2024Aug 18, 2024

• CMMC-on-Exposome-Prediction

  Public
  Python

  •1•0•0•0•Updated Feb 5, 2024Feb 5, 2024

• chipenrich

  Public
  This is the fork of the Bioconductor-mirror repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/chipenrich.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=chipenrich.

  transcription-factorschip-seqhistone-modifications+ 1geneset-enrichment

  R

  •3•2•1•0•Updated Jan 16, 2024Jan 16, 2024

• chipenrich.data

  Public
  Experimental version of data package associated with chipenrich

  gene-setschip-seqgene-set-enrichment

  R

  •2•2•1•0•Updated Sep 25, 2023Sep 25, 2023

• piOxiDB-data-process-pipeline

  Public
  Python

  •1•0•0•0•Updated Aug 14, 2023Aug 14, 2023

• imagesForSartorlab

  Public
  0•0•0•0•Updated May 11, 2020May 11, 2020

• improving_enhancer_definitions

  Public
  Repository for building experimental enhancer locus definitions for chipenrich

  R

  •0•0•0•0•Updated Apr 23, 2020Apr 23, 2020

• proxReg

  Public
  Code to reproduce analysis in proxReg manuscript

  Python

  •1•1•0•0•Updated Feb 14, 2020Feb 14, 2020

• polyenrich

  Public
  Repository for the Poly-Enrich paper

  0•0•0•0•Updated Jan 29, 2020Jan 29, 2020

• mint_galaxy

  Public
  Galaxy pipeline for the Mint

  dna-methylationdna-hydroxymethylationgenome-browser+ 1galaxy-instance

  Shell

  •0•1•0•0•Updated Nov 2, 2017Nov 2, 2017

• mint

  Public
  A pipeline for the integration of DNA methylation and hydroxymethylation data

  dna-hydroxymethylationdna-methylationgenome-browser

  R

  •3•5•1•0•Updated Sep 19, 2017Sep 19, 2017

• mint_test

  Public
  Test data for the mint methylation pipeline

  test-datadna-methylationdna-hydroxymethylation

  0•0•0•0•Updated Sep 5, 2017Sep 5, 2017