README

Bioregionalization

An R package to compare several methods of bioregionalization and estimate the contributions of species

Bioregionalization is a package designed to compare several methods of clustering based on multivariate or network approaches.

1 Installation

devtools::install_github("pierredenelle/Bioregionalization", build_vignettes = TRUE)

2 Tutorial

A tutorial vignette showing the main steps of the processing can be visualised with the following command line:

vignette("tutorial", package = "Bioregionalization")

## Warning: vignette 'tutorial' not found

The .pdf of the vignette can also be accessed here.

3 Dependencies

Bioregionalization depends on dplyr, ecodist, reshape2, fastcluster, DescTools, ade4, cluster, sf, ggplot2, Rcpp, SMUT and igraph.