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jGaboardi:deprecate_pysal_geoms --> pysal:deprecate_pysal_geoms #754

Merged
merged 181 commits into from
Dec 11, 2023
Merged

jGaboardi:deprecate_pysal_geoms --> pysal:deprecate_pysal_geoms #754

merged 181 commits into from
Dec 11, 2023

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@jGaboardi jGaboardi commented Dec 11, 2023 •
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jGaboardi:deprecate_pysal_geoms --> pysal:deprecate_pysal_geoms

jGaboardi and others added 30 commits September 13, 2021 21:16
@jGaboardi
depwarning for libpysal geometries
2f8533e
@jGaboardi
more descriptive FutureWarning
a051c72
@jGaboardi @martinfleis
Update spaghetti/network.py
3bc0e4e 
Co-authored-by: Martin Fleischmann <[email protected]>
@jGaboardi
Merge pull request pysal#649 from jGaboardi/depre_note
ee17b8e 
add deprecation warning for libpysal geometries
@jGaboardi
ignore versioneer files in codecov
311eef0
@jGaboardi
reduce builds for codecov report
68ef9ff
@jGaboardi
Merge pull request pysal#651 from jGaboardi/xversioneer_codecov
2101c8e 
ignore versioneer files for code coverage reporting
@jGaboardi
add manual triggers for workflows
b39305b
@jGaboardi
Merge pull request pysal#652 from jGaboardi/add_manual_trigger
075619c 
add manual triggers for workflows
@jGaboardi
access version from pacakge
329ebff
@jGaboardi
better solution for version fetch
aa9ada4
@jGaboardi
syntax correction
5e7c288
@jGaboardi
Merge pull request pysal#654 from jGaboardi/update_changelog_notebook
31c7591 
access version from pacakge in gitcount
@jGaboardi
don't run gitcount in r&p action
c54f585
@jGaboardi
remove gitcount notebook
794c870
@jGaboardi
try new automated release notes
85d45b4
@jGaboardi
updated release notes automation
2c88638
@jGaboardi
Merge pull request pysal#655 from jGaboardi/try_automated_release_action
58fabb3 
Try automated release notes action
@jGaboardi
attempt 3.10 in CI
76c1439
@jGaboardi
fix file name
231185c
@jGaboardi
test base and dev on 3.10
68bd3a6
@jGaboardi
update codecov
b2cd215
@jGaboardi
slim down testing matrix
93a057b
@jGaboardi
slim down testing matrix [2]
89f0cf1
@jGaboardi
slim down testing matrix [3]
e9f46a2
@jGaboardi
streamline matrix logic
a5673b9
@jGaboardi
Merge pull request pysal#657 from jGaboardi/try_310
f10f9d0 
attempt Python 3.10 in CI
@jGaboardi
try pytest-xdist for multicore tests
0f05825
@jGaboardi
update CI environs
5174254
@jGaboardi
update variable syntax
0ec3425
jGaboardi and others added 23 commits May 7, 2023 16:35
@jGaboardi
Fix memory leak in full_distance_matrix() (pysal#719)
6ba30c0 
* resolves pysal#715

* no strict kwarg for zip in 3.8
@jGaboardi
revisit _points_as_gdf() (pysal#720)
7dfb5e3 
* revisit _points_as_gdf

* use shapely.points()

* combined positional arg for points

* update shapely verion reqs
@jGaboardi
Overhaul repo infrastructure (pysal#721)
b1feadd 
* update pre-commit

* update infrastructure

* ruff [1]

* ruffen repo [2]

* update infra [2]

* update extract_comp() stacklevel

* noqa ARG001 for geom_col for now
@jGaboardi
refactor element_as_gdf internals (pysal#724)
c25f662 
* refactor element_as_gdf internal constructors

* deprecate geom_col kwarg in elem_as_gdf

* update element_as_gdf() stacklevel
@pre-commit-ci
[pre-commit.ci] pre-commit autoupdate (pysal#728)
eed5f2b 
updates:
- [github.com/charliermarsh/ruff-pre-commit: v0.0.265 → v0.0.270](astral-sh/ruff-pre-commit@v0.0.265...v0.0.270)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@pre-commit-ci @martinfleis
[pre-commit.ci] pre-commit autoupdate (pysal#730)
d2b3770 
* [pre-commit.ci] pre-commit autoupdate

updates:
- [github.com/charliermarsh/ruff-pre-commit: v0.0.270 → v0.0.272](astral-sh/ruff-pre-commit@v0.0.270...v0.0.272)

* new repo

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Martin Fleischmann <[email protected]>
@jGaboardi
update micromamba in CI (pysal#732)
e349bf5 
* update micromamba in CI

* add @v1
@martinfleis
Doc patch (pysal#733)
1643452 
* import from module not class

* fix pointpats intersphinx link
@jGaboardi
force reinstall package for version fetching in build_docs.yaml (py…
b945bf1 
…sal#734)

* force renistall for buil_docs.yaml

* martin comment
@pre-commit-ci
[pre-commit.ci] pre-commit autoupdate (pysal#735)
1c4751d 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.272 → v0.0.275](astral-sh/ruff-pre-commit@v0.0.272...v0.0.275)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@pre-commit-ci
[pre-commit.ci] pre-commit autoupdate (pysal#736)
9bc3a38 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.275 → v0.0.276](astral-sh/ruff-pre-commit@v0.0.275...v0.0.276)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@pre-commit-ci
[pre-commit.ci] pre-commit autoupdate (pysal#737)
075bce1 
updates:
- [github.com/psf/black: 23.3.0 → 23.7.0](psf/black@23.3.0...23.7.0)
- [github.com/astral-sh/ruff-pre-commit: v0.0.276 → v0.0.277](astral-sh/ruff-pre-commit@v0.0.276...v0.0.277)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@pre-commit-ci
[pre-commit.ci] pre-commit autoupdate (pysal#739)
a040d25 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.277 → v0.0.278](astral-sh/ruff-pre-commit@v0.0.277...v0.0.278)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@jGaboardi
resolve pysal#740 (pysal#741)
93cd534
@dependabot
Bump actions/checkout from 3 to 4 (pysal#744)
f4ab91d 
Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v3...v4)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@dependabot
Bump codecov/codecov-action from 3 to 4 (pysal#745)
51856f8 
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 3 to 4.
- [Release notes](https://github.com/codecov/codecov-action/releases)
- [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md)
- [Commits](codecov/codecov-action@v3...v4)

---
updated-dependencies:
- dependency-name: codecov/codecov-action
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@jGaboardi
Revert "Bump codecov/codecov-action from 3 to 4 (pysal#745)" (pysal#746)
fd8f98e 
This reverts commit 51856f8.
@jGaboardi
proper README in pyproject.toml (pysal#747)
0054b7f
@jGaboardi
Linting & Formatting - 2023-10-03 (pysal#749)
0254ca9 
* update pre-commit

* reup linting and formatting
@dependabot
Bump actions/github-script from 6 to 7 (pysal#750)
c09f1ec 
Bumps [actions/github-script](https://github.com/actions/github-script) from 6 to 7.
- [Release notes](https://github.com/actions/github-script/releases)
- [Commits](actions/github-script@v6...v7)

---
updated-dependencies:
- dependency-name: actions/github-script
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@jGaboardi
Provide testing support for Python 3.12 – drop support for {3.8, 3.9} (…
2d60044 
…pysal#751)

* update precommit

* update CI env

* update workflows

* Python 312 support - drop 38/39

* update test for Python 312 pass (minor rounding)

* update CI versions/syntax

* proper dev install of shapely

* martin suggestion - geos

* matplotlib for esda

* matplotlib for esda

* stable -> latest

* bash evaluator

* bash evaluator [2]

* not no-optional experssion

* not no-optional expression [2]

* not no-optional expression [3]

* remove section from README
@dependabot
Bump actions/setup-python from 4 to 5 (pysal#753)
6b3294c 
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4 to 5.
- [Release notes](https://github.com/actions/setup-python/releases)
- [Commits](actions/setup-python@v4...v5)

---
updated-dependencies:
- dependency-name: actions/setup-python
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@jGaboardi
Utilize ruff-format over black for formatting (pysal#752)
ed41ceb 
* update pre-commit

* adopt ruff-format over black for formatting

* remove commented lines

* martin suggestion
@jGaboardi jGaboardi self-assigned this Dec 11, 2023
@jGaboardi jGaboardi changed the title jGaboardi/deprecate_pysal_geoms --> pysal/deprecate_pysal_geoms jGaboardi:deprecate_pysal_geoms --> pysal:deprecate_pysal_geoms Dec 11, 2023
@martinfleis
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I am not gonna review this :D

@jGaboardi
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I am not gonna review this :D

Was not even considering asking you. This is on me.

@jGaboardi jGaboardi merged commit 3353b74 into pysal:deprecate_pysal_geoms Dec 11, 2023
18 checks passed
@jGaboardi jGaboardi deleted the deprecate_pysal_geoms branch December 11, 2023 16:10
@jGaboardi jGaboardi restored the deprecate_pysal_geoms branch December 11, 2023 16:10
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