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Add pre-commit

Add pre-commit #183

Workflow file for this run

name: build
on:
push:
branches:
- '*'
pull_request:
branches:
- '*'
workflow_dispatch:
workflow: '*'
env:
MPLBACKEND: agg
jobs:
# Make sure all necessary files will be included in a release
manifest:
name: check manifest
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: actions/setup-python@v4
- name: Install dependencies
run: |
pip install manifix
- name: Check MANIFEST.in file
run: |
python setup.py manifix
build-with-pip:
name: ${{ matrix.os }}-py${{ matrix.python-version }}${{ matrix.LABEL }}
runs-on: ${{ matrix.os }}
timeout-minutes: 15
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, windows-latest, macos-latest]
python-version: ['3.10', '3.11']
include:
# Oldest supported version of main dependencies
- os: ubuntu-latest
python-version: 3.7
OLDEST_SUPPORTED_VERSION: true
DEPENDENCIES: diffpy.structure==3.0.0 matplotlib==3.3 numpy==1.17 orix==0.9.0 scipy==1.1 tqdm==4.9
LABEL: -oldest
steps:
- uses: actions/checkout@v3
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies and package
shell: bash
run: |
pip install -U -e .'[tests]'
- name: Install oldest supported version
if: ${{ matrix.OLDEST_SUPPORTED_VERSION }}
run: |
pip install ${{ matrix.DEPENDENCIES }}
- name: Display Python, pip and package versions
run: |
python -V
pip -V
pip list
- name: Run docstring tests
if: ${{ matrix.os == 'ubuntu-latest' }}
continue-on-error: true
run: |
pytest --doctest-modules --doctest-continue-on-failure --ignore-glob=diffsims/tests/*
- name: Run tests
run: |
pytest -n 2 --cov=diffsims --pyargs diffsims
- name: Generate line coverage
if: ${{ matrix.os == 'ubuntu-latest' }}
run: |
coverage report --show-missing
- name: Upload coverage to Coveralls
if: ${{ matrix.os == 'ubuntu-latest' }}
uses: AndreMiras/coveralls-python-action@develop
with:
parallel: true
coveralls-finish:
needs: build-with-pip
runs-on: ubuntu-latest
steps:
- name: Coveralls finished
uses: AndreMiras/coveralls-python-action@develop
with:
parallel-finished: true