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code_issues.html

@@ -75,8 +75,8 @@
 <link href="site_libs/quarto-html/quarto-syntax-highlighting-dark-d166b450ba5a8e9f7a0ab969bf6592c1.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap-623d946cbb11cc8e81678cea30ec8bd1.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
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+<link href="site_libs/bootstrap/bootstrap-0a550434fc09a61fdda32aba084338c3.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-dark-f8242f33253a93ab94b82dd48e3743e7.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
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   "location": "sidebar",
   "copy-button": false,
@@ -410,7 +410,7 @@ <h3 class="anchored" data-anchor-id="details-1">Details</h3>
 </div>
 </div>
 </div>
-<p>Changing the seed is not necessarily forbidden. However, users should be able to control which seed to use. Therefore, avoid code that changes the seed without user consent (e.g.: <code>set.seed(123)</code>). A good solution for allowing to set a seed is to add an argument <code>seed</code> to your function and set it conditionally.</p>
+<p>Changing the seed is not necessarily forbidden. However, users should be able to control which seed to use. Therefore, avoid code that changes the seed without user consent (e.g., <code>set.seed(123)</code>). A good solution for allowing to set a seed is to add an argument <code>seed</code> to your function and set it conditionally.</p>
 <div class="cell">
 <div class="sourceCode cell-code" id="cb7"><pre class="sourceCode r code-with-copy"><code class="sourceCode r"><span id="cb7-1"><a href="#cb7-1" aria-hidden="true" tabindex="-1"></a><span class="cf">function</span>(... , <span class="at">seed =</span> <span class="cn">NULL</span>){</span>
 <span id="cb7-2"><a href="#cb7-2" aria-hidden="true" tabindex="-1"></a>  <span class="cf">if</span>(<span class="sc">!</span><span class="fu">is.null</span>(seed)){</span>
@@ -551,17 +551,17 @@ <h3 class="anchored" data-anchor-id="details-3">Details</h3>
 <div id="callout-7" class="callout-7-contents callout-collapse collapse">
 <div class="callout-body-container callout-body">
 <p>Please make sure that you do not change the user’s options, par or working directory. If you really have to do so within functions, please ensure with an <em>immediate</em> call of on.exit() that the settings are reset when the function is exited.<br>
-e.g.:<br>
+e.g.,<br>
 …<br>
 oldpar &lt;- par(no.readonly = TRUE) # code line i<br>
 on.exit(par(oldpar)) # code line i + 1<br>
 …<br>
 par(mfrow=c(2,2)) # somewhere after<br>
 …<br>
-e.g.:<br>
+e.g.,<br>
 If you’re not familiar with the function, please check ?on.exit. This function makes it possible to restore options before exiting a function even if the function breaks. Therefore it needs to be called immediately after the option change within a function.</p>
 <p>Please always make sure to reset to user’s options(), working directory or par() after you changed it in examples and vignettes and demos.<br>
-e.g.:<br>
+e.g.,<br>
 oldpar &lt;- par(mfrow = c(1,2))<br>
 …<br>
 par(oldpar)</p>
@@ -733,7 +733,7 @@ <h3 class="anchored" data-anchor-id="details-6">Details</h3>
 </div>
 <div id="callout-12" class="callout-12-contents callout-collapse collapse">
 <div class="callout-body-container callout-body">
-<p>Please do not modify the global environment (e.g.&nbsp;by using &lt;&lt;-) in your functions. This is not allowed by the CRAN policies.</p>
+<p>Please do not modify the global environment (e.g., by using &lt;&lt;-) in your functions. This is not allowed by the CRAN policies.</p>
 </div>
 </div>
 </div>

description_issues.html

@@ -75,8 +75,8 @@
 <link href="site_libs/quarto-html/quarto-syntax-highlighting-dark-d166b450ba5a8e9f7a0ab969bf6592c1.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap-623d946cbb11cc8e81678cea30ec8bd1.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
-<link href="site_libs/bootstrap/bootstrap-dark-31a2823bf89caa9a5f58f0c727dfaa0f.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
+<link href="site_libs/bootstrap/bootstrap-0a550434fc09a61fdda32aba084338c3.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-dark-f8242f33253a93ab94b82dd48e3743e7.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
 <script id="quarto-search-options" type="application/json">{
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@@ -293,7 +293,7 @@ <h2 class="anchored" data-anchor-id="problem">Problem</h2>
 </section>
 <section id="solution" class="level2">
 <h2 class="anchored" data-anchor-id="solution">Solution</h2>
-<p>All references to names of software, packages and API names in the description section of the DESCRIPTION file should be wrapped in single quotes. e.g.: ‘ggplot2’, ‘Python’, etc.</p>
+<p>All references to names of software, packages and API names in the description section of the DESCRIPTION file should be wrapped in single quotes. e.g., ‘ggplot2’, ‘Python’, etc.</p>
 <section id="details" class="level3">
 <h3 class="anchored" data-anchor-id="details">Details</h3>
 <div class="callout callout-style-simple callout-note no-icon callout-titled" title="CRAN Review Communication">

docs_issues.html

@@ -75,8 +75,8 @@
 <link href="site_libs/quarto-html/quarto-syntax-highlighting-dark-d166b450ba5a8e9f7a0ab969bf6592c1.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap-623d946cbb11cc8e81678cea30ec8bd1.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
-<link href="site_libs/bootstrap/bootstrap-dark-31a2823bf89caa9a5f58f0c727dfaa0f.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
+<link href="site_libs/bootstrap/bootstrap-0a550434fc09a61fdda32aba084338c3.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-dark-f8242f33253a93ab94b82dd48e3743e7.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
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@@ -284,7 +284,7 @@ <h3 class="anchored" data-anchor-id="details">Details</h3>
 </div>
 <div id="callout-1" class="callout-1-contents callout-collapse collapse">
 <div class="callout-body-container callout-body">
-<p>Please add \value to .Rd files regarding exported methods and explain the functions results in the documentation. Please write about the structure of the output (class) and also what the output means. (If a function does not return a value, please document that too, e.g.&nbsp;\value{No return value, called for side effects} or similar)</p>
+<p>Please add \value to .Rd files regarding exported methods and explain the functions results in the documentation. Please write about the structure of the output (class) and also what the output means. (If a function does not return a value, please document that too, e.g., \value{No return value, called for side effects} or similar)</p>
 </div>
 </div>
 </div>

general_issues.html

@@ -41,8 +41,8 @@
 <link href="site_libs/quarto-html/quarto-syntax-highlighting-dark-d166b450ba5a8e9f7a0ab969bf6592c1.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap-623d946cbb11cc8e81678cea30ec8bd1.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
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+<link href="site_libs/bootstrap/bootstrap-0a550434fc09a61fdda32aba084338c3.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-dark-f8242f33253a93ab94b82dd48e3743e7.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
 <script id="quarto-search-options" type="application/json">{
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@@ -255,7 +255,7 @@ <h1>Structuring of Examples</h1>
 </ul></li>
 <li><strong>\dontrun{}:</strong>
 <ul>
-<li>Unexecutable examples due to missing information (e.g.&nbsp;API calls where a password is needed)</li>
+<li>Unexecutable examples due to missing information (e.g., API calls where a password is needed)</li>
 <li>Examples which require additional software</li>
 <li>Never executed, are automatically marked with a comment (“# Not run:”) in the Help file.</li>
 </ul></li>
@@ -272,7 +272,7 @@ <h1>Structuring of Examples</h1>
 <li><strong>if(requireNamespace(“packagename”)){}</strong>
 <ul>
 <li>Used for examples which need particular packages to run</li>
-<li>Those packages should be listed in the Suggests filed of the DESCRIPTION file</li>
+<li>Those packages should be listed in the Suggests field of the DESCRIPTION file</li>
 </ul></li>
 <li><strong>\dontshow{}:</strong>
 <ul>
@@ -305,9 +305,9 @@ <h1>Structuring of Examples</h1>
 </div>
 <div id="callout-3" class="callout-3-contents callout-collapse collapse">
 <div class="callout-body-container callout-body">
-<p>\dontrun{} should only be used if the example really cannot be executed (e.g.&nbsp;because of missing additional software, missing API keys, …) by the user. That’s why wrapping examples in \dontrun{} adds the comment (“# Not run:”) as a warning for the user. Does not seem necessary. Please replace \dontrun with \donttest.</p>
+<p>\dontrun{} should only be used if the example really cannot be executed (e.g., because of missing additional software, missing API keys, …) by the user. That’s why wrapping examples in \dontrun{} adds the comment (“# Not run:”) as a warning for the user. Does not seem necessary. Please replace \dontrun with \donttest.</p>
 <p>Please unwrap the examples if they are executable in &lt; 5 sec, or replace \dontrun{} with \donttest{}.</p>
-<p>Functions which are supposed to only run interactively (e.g.&nbsp;shiny) should be wrapped in if(interactive()). Please replace \dontrun{} with if(interactive()){} if possible, then users can see that the functions are not intended for use in scripts.</p>
+<p>Functions which are supposed to only run interactively (e.g., shiny) should be wrapped in if(interactive()). Please replace \dontrun{} with if(interactive()){} if possible, then users can see that the functions are not intended for use in scripts.</p>
 <p>All your examples are wrapped in \donttest{} and therefore do not get tested.<br>
 Please unwrap the examples if that is feasible and if they can be executed in &lt; 5 sec for each Rd file or create additionally small toy examples to allow automatic testing.</p>
 </div>

index.html

@@ -41,8 +41,8 @@
 <link href="site_libs/quarto-html/quarto-syntax-highlighting-dark-d166b450ba5a8e9f7a0ab969bf6592c1.css" rel="prefetch" class="quarto-color-scheme quarto-color-alternate" id="quarto-text-highlighting-styles">
 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
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+<link href="site_libs/bootstrap/bootstrap-0a550434fc09a61fdda32aba084338c3.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-dark-f8242f33253a93ab94b82dd48e3743e7.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
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preface.html

@@ -75,8 +75,8 @@
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 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap-623d946cbb11cc8e81678cea30ec8bd1.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
-<link href="site_libs/bootstrap/bootstrap-dark-31a2823bf89caa9a5f58f0c727dfaa0f.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
+<link href="site_libs/bootstrap/bootstrap-0a550434fc09a61fdda32aba084338c3.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-dark-f8242f33253a93ab94b82dd48e3743e7.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
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   "copy-button": false,
@@ -306,14 +306,14 @@ <h3 class="anchored" data-anchor-id="session-info">Session info</h3>
 <pre><code>─ Session info ───────────────────────────────────────────────────────────────
  setting  value
  version  R version 4.4.2 (2024-10-31)
- os       Ubuntu 22.04.5 LTS
+ os       Ubuntu 24.04.1 LTS
  system   x86_64, linux-gnu
  ui       X11
  language (EN)
  collate  C.UTF-8
  ctype    C.UTF-8
  tz       UTC
- date     2024-12-01
+ date     2024-12-31
  pandoc   3.4 @ /opt/quarto/bin/tools/ (via rmarkdown)
 
 ─ Packages ───────────────────────────────────────────────────────────────────
@@ -360,8 +360,8 @@ <h3 class="anchored" data-anchor-id="session-info">Session info</h3>
  P xtable        1.8-4   2019-04-21 [?] RSPM (R 4.4.0)
  P yaml          2.3.10  2024-07-26 [?] RSPM (R 4.4.0)
 
- [1] /home/runner/work/cran-cookbook/cran-cookbook/renv/library/linux-ubuntu-jammy/R-4.4/x86_64-pc-linux-gnu
- [2] /home/runner/.cache/R/renv/sandbox/linux-ubuntu-jammy/R-4.4/x86_64-pc-linux-gnu/db5e602d
+ [1] /home/runner/work/cran-cookbook/cran-cookbook/renv/library/linux-ubuntu-noble/R-4.4/x86_64-pc-linux-gnu
+ [2] /home/runner/.cache/R/renv/sandbox/linux-ubuntu-noble/R-4.4/x86_64-pc-linux-gnu/db5e602d
 
  P ── Loaded and on-disk path mismatch.
 

resources.html

@@ -40,8 +40,8 @@
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 <script src="site_libs/bootstrap/bootstrap.min.js"></script>
 <link href="site_libs/bootstrap/bootstrap-icons.css" rel="stylesheet">
-<link href="site_libs/bootstrap/bootstrap-623d946cbb11cc8e81678cea30ec8bd1.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
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+<link href="site_libs/bootstrap/bootstrap-0a550434fc09a61fdda32aba084338c3.min.css" rel="stylesheet" append-hash="true" class="quarto-color-scheme" id="quarto-bootstrap" data-mode="light">
+<link href="site_libs/bootstrap/bootstrap-dark-f8242f33253a93ab94b82dd48e3743e7.min.css" rel="prefetch" append-hash="true" class="quarto-color-scheme quarto-color-alternate" id="quarto-bootstrap" data-mode="dark">
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