optimize dev container setup

.devcontainer/.env

@@ -1,16 +1,5 @@
-INSTALL_ZSH=false
-INSTALL_FISH=true
-UPGRADE_PACKAGES=true
 RENV_PATHS_CACHE_HOST=/opt/local/renv/cache
 RENV_PATHS_CACHE_CONTAINER=/renv/cache
 RENV_PATHS_CACHE=/renv/cache
-USER=eric
-USERID=1000
-GROUPID=1000
-PASSWORD=1rstudio
-VOLUME_PATH=/home/eric/r_projects
-LOCAL_PORT=3955
-QUARTO_VERSION=latest
-RSTUDIO_VERSION=2022.02.1-461
-S6_VERSION=v1.21.7.0
-COMPOSE_PROJECT_NAME=rweekly
+DISABLE_AUTH=true
+PASSWORD=rstudio

.devcontainer/Dockerfile

@@ -1,88 +1,13 @@
-###################################################################################################################
-# Adapted from https://github.com/microsoft/vscode-dev-containers/blob/master/containers/r/.devcontainer/Dockerfile
-# licence: MIT
-###################################################################################################################
+FROM ghcr.io/rocker-org/devcontainer/tidyverse:4.2
 
-FROM rocker/r-ver:4.1.3
+# key dependencies for utilities
+RUN apt-get update -qq \
+  && export DEBIAN_FRONTEND=noninteractive \
+  && apt-get -y install --no-install-recommends libxt6 curl python3-pip libsodium-dev imagemagick libmagick++-dev
 
-# Options for setup script
-ARG USERNAME
-ARG INSTALL_ZSH="false"
-ARG USER_UID="1000"
-ARG USER_GID="1000"
-ARG UPGRADE_PACKAGES="false"
-ARG INSTALL_OHMYZSH="false"
-ARG INSTALL_NONFREE="false"
-ARG QUARTO_VERSION=latest
-
-# key dependencies for certain R packages
-RUN apt-get update \
-    && export DEBIAN_FRONTEND=noninteractive \
-    && apt-get -y install --no-install-recommends software-properties-common curl wget libssl-dev libxml2-dev libsodium-dev imagemagick libmagick++-dev libgit2-dev libssh2-1-dev zlib1g-dev librsvg2-dev libudunits2-dev libcurl4-openssl-dev python3-pip pandoc libzip-dev libfreetype6-dev libfontconfig1-dev tk libpq5 libxt6 openssh-client openssh-server \
-    && apt-get autoremove -y && apt-get clean -y && rm -rf /var/lib/apt/lists/*
-
-COPY library-scripts/common-debian.sh /tmp/library-scripts/
-RUN apt-get update && bash /tmp/library-scripts/common-debian.sh ${INSTALL_ZSH} ${USERNAME} ${USER_UID} ${USER_GID} ${UPGRADE_PACKAGES} ${INSTALL_OHMYZSH} ${INSTALL_NONFREE}
-
-# install R packages needed for VSCode interaction and package management
-RUN install2.r --error --skipinstalled --ncpus -4 languageserver renv remotes httpgd
-
-# install radian via python and pip3
-RUN apt-get update \
-    && export DEBIAN_FRONTEND=noninteractive \
-    && apt-get -y install --no-install-recommends python3-setuptools
-
-RUN pip3 install radian
-
-# install dot net core runtime for the R Tools plugin
-RUN wget https://packages.microsoft.com/config/ubuntu/20.04/packages-microsoft-prod.deb -O /tmp/packages-microsoft-prod.deb \
-    && dpkg -i /tmp/packages-microsoft-prod.deb
-
-RUN apt-get update \
-    && apt-get -y install --no-install-recommends apt-transport-https \
-    && apt-get -y install --no-install-recommends dotnet-sdk-3.1
-
-# ensure that the renv package cache env var is accessible in default R installation
-RUN echo "RENV_PATHS_CACHE=/renv/cache" >> /usr/local/lib/R/etc/Renviron
-
-# copy the modified .Rprofile template to the renv cache
-#COPY library-scripts/.Rprofile-vscode /renv/.Rprofile-vscode
-
-# [Optional] Uncomment this section to add Quarto to the container
-RUN /rocker_scripts/install_quarto.sh
-
-# [Optional] Uncomment this section to add Hugo to the container
-# Customize version number as appropriate
-#RUN curl -L https://github.com/gohugoio/hugo/releases/download/v0.87.0/hugo_extended_0.87.0_Linux-64bit.deb -o /tmp/hugo.deb
-#RUN apt-get -y install ./tmp/hugo.deb
-
-# [Optional] Uncomment this section to add addtional system dependencies needed for project
-# RUN apt-get update \
-#     && export DEBIAN_FRONTEND=noninteractive \
-#     && apt-get -y install --no-install-recommends ---packages list----
-
-# [Optional] Uncomment this section for linking a local pusleaudio sound system on a linux host
-# to the container.
-#RUN apt-get update \
-#    && export DEBIAN_FRONTEND=noninteractive \
-#    && apt-get -y install --no-install-recommends libpulse0 libasound2 libasound2-plugins pulseaudio-utils
-
-# install obs-cli (Go version)
-# https://github.com/muesli/obs-cli/releases
-#ADD https://github.com/muesli/obs-cli/releases/download/v0.4.0/obs-cli_0.4.0_linux_x86_64.tar.gz /obs-cli-linux.tar.gz
-#RUN tar -zxvf obs-cli-linux.tar.gz
-#RUN cp /obs-cli /usr/local/bin/obs-cli
-#RUN chmod 755 /usr/local/bin/obs-cli
-
-# install obs-cli (Javascript version)
-# https://github.com/leafac/obs-cli/releases
-#ADD https://github.com/leafac/obs-cli/releases/download/v2.2.3/obs-cli-linux /usr/local/bin/obs-cli-js
-#RUN chmod 755 /usr/local/bin/obs-cli-js
-
-# [Optional] install additional R packages
+# install additional R packages
 RUN install2.r --error --skipinstalled --ncpus -4 tidyRSS pkgsearch lubridate dplyr rtweet readr longurl tidyr twitterwidget urltools
-
 RUN installGithub.r rweekly/rweekly.tools rweekly/rweekly.highlights
 
 # [Optional] Set the default user. Omit if you want to keep the default as root.
-USER $USERNAME
+USER rstudio

.devcontainer/devcontainer.json

@@ -1,13 +1,14 @@
-// For format details, see https://aka.ms/vscode-remote/devcontainer.json or this file's README at:
-// https://github.com/microsoft/vscode-dev-containers/tree/v0.134.1/containers/r
 {
-	"name": "R",
+	"name": "${localWorkspaceFolderBasename}",
 	"dockerComposeFile": "docker-compose.yml",
 	"workspaceFolder": "/workspace",
 	"service": "vscode",
 
 	"features": {
-		"fish": "latest"
+		"ghcr.io/meaningful-ooo/devcontainer-features/fish:1": {},
+		"ghcr.io/rocker-org/devcontainer-features/pandoc:latest": {},
+		"ghcr.io/guiyomh/features/vim:0": {},
+		"ghcr.io/devcontainers/features/node:1": {}
 	},
 
 	// Set *default* container specific settings.json values on container create.
@@ -29,6 +30,7 @@
 		"r.terminalPath": "/usr/local/bin/radian",
 		"r.interpreterPath": "/usr/local/bin/R",
 		"r.debugger.timeouts.startup": 8000,
+		"r.lsp.diagnostics": false,
 		"editor.wordWrap": "on",
 		"editor.tabSize": 2,
 		"path-autocomplete.pathMappings": {
@@ -42,34 +44,34 @@
 	// Add the IDs of extensions you want installed when the container is created.
 	"extensions": [
 		"REditorSupport.r",
-		//"/renv/cache/r-latest.vslx",
 		"ionutvmi.path-autocomplete",
 		"usernamehw.errorlens",
 		"mhutchie.git-graph",
 		"wayou.vscode-todo-highlight",
-		"tomoki1207.pdf",
 		"DavidAnson.vscode-markdownlint",
 		"Rubymaniac.vscode-paste-and-indent",
-		"GrapeCity.gc-excelviewer",
 		"IBM.output-colorizer",
-		//"Mohamed-El-Fodil-Ihaddaden.shinysnip",
-		"hediet.vscode-drawio",
-		//"MS-vsliveshare.vsliveshare-pack",
 		"ms-python.python",
 		"RDebugger.r-debugger",
-		//"GitHub.copilot",
 		"eamodio.gitlens",
 		"GitHub.vscode-pull-request-github",
-		"quarto.quarto"
-		//"hoovercj.vscode-power-mode"
-	]
+		"quarto.quarto",
+		"redhat.vscode-yaml"
+	],
 
 	// Use 'forwardPorts' to make a list of ports inside the container available locally.
 	// "forwardPorts": [],
 
 	// Use 'postCreateCommand' to run commands after the container is created.
-	// "postCreateCommand": "R --version",
+	//"postCreateCommand": "python3 -m pip install jupyter",
+	// I tried automating the npm reqs for running rstudio server inside the contianer
+	// but these commands do not seem to work
+	//"postCreateCommand": [
+	//  "npm install -g npm",
+	//  "npm install -g localtunnel"
+	//]
 
-	// Uncomment to connect as a non-root user. See https://aka.ms/vscode-remote/containers/non-root.
-	// "remoteUser": "docker"
+	// Comment out to connect as root instead. More info: https://aka.ms/vscode-remote/containers/non-root.
+	//"remoteUser": "vscode"
 }
+

.devcontainer/docker-compose.yml

@@ -5,34 +5,10 @@ services:
     build:
       context: .
       dockerfile: Dockerfile
-      args:
-        USERNAME: ${USER}
-        QUARTO_VERSION: ${QUARTO_VERSION}
-    user: ${USER}
     volumes:
       - ..:/workspace:cached
-      - ${RENV_PATHS_CACHE_HOST}:/renv/cache
     cap_add:
       - SYS_PTRACE
     security_opt:
       - seccomp:unconfined
-    command: sleep infinity
-    env_file: .env
-
-  rstudiodevcontainer:
-    build:
-      context: ./rstudio_docker
-      args:
-        S6_VERSION: ${S6_VERSION}
-        RSTUDIO_VERSION: ${RSTUDIO_VERSION}
-        QUARTO_VERSION: ${QUARTO_VERSION}
-    volumes:
-      - ${VOLUME_PATH}:${VOLUME_PATH}
-      - /home/${USER}/.ssh:/home/${USER}/.ssh
-      - ${RENV_PATHS_CACHE_HOST}:${RENV_PATHS_CACHE_CONTAINER}
-      - ${VOLUME_PATH}/.devcontainer/rstudio_config_dir:/home/${USER}/.config/rstudio
-    restart:
-      unless-stopped
-    ports:
-      - ${LOCAL_PORT}:8787
-    env_file: .env
+    env_file: .env