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updating readme
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roxana-zeraati committed Feb 9, 2023
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Expand Up @@ -14,20 +14,20 @@ Please cite the above two references when you use these codes for a scientific p
Functions/scripts descriptions:
- act_gen: the function that simulates the network (import from activity_generator.py)
- run_ac.py: the script for simulating the network and computing autocorrelations.
- run_cc.py: the script for simulating the network and computing cross-correlations.
- run_cc.py: the script for simulating the network and computing cross-correlations.



Available connectivity structures for the network (conn_type variable):
- 'local': 2D network with local connectivity (defined within the radius R in Chebyshev distances, R=1 is the Moore neighborhood)
- 'local_1D': 1D network with local connectivity (defined within the radius R in Chebyshev distances)
- 'random': 2D network with random connectivity
- 'random_spR' (e.g., 'random_sp2'): 2D network with 8 random connections within the radius R = 2,3,5,7
- 'random_spR' (e.g., 'random_sp2'): 2D network with 8 random connections within the radius R = 2,3,5,7


Additional network models:
- Network with random connectivity (conn_type = 'random_hetro') and two different cell types: act_gen defined in activity_generator_hetro.py
- Network with synaptic timescales: act_gen defined in activity_generator_wSynFilter.py
- Network with synaptic timescales: act_gen defined in activity_generator_wSynFilter.py


## Dependencies
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