Merge pull request #50 from sanger-tol/test_full_upd

Update test_gsMetZobe1.yaml
sanger-tol · Aug 15, 2024 · bbdf389 · bbdf389
2 parents db683a4 + 4b9abd5
commit bbdf389
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Showing 2 changed files with 4 additions and 2 deletions.
diff --git a/assets/test_gsMetZobe1.yaml b/assets/test_gsMetZobe1.yaml
@@ -1,7 +1,10 @@
 dataset:
   id: gsMetZobe1
   illumina_10X:
-    reads: /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/10x/
+    reads:
+      - /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/10x/gsMetZobe1_S6_L008_R1_001.fastq.gz
+      - /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/10x/gsMetZobe1_S6_L008_R2_001.fastq.gz
+      - /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/10x/gsMetZobe1_S6_L008_I1_001.fastq.gz
   pacbio:
     reads:
       - reads: /lustre/scratch123/tol/resources/genomeassembly/testdata/gsMetZobe1/pacbio/m64125_200823_145825.ccs.bc1019_BAK8B_OA--bc1019_BAK8B_OA.filtered.fasta.gz

diff --git a/conf/test_full.config b/conf/test_full.config
@@ -22,6 +22,5 @@ params {
 
     // Input data for full size test
     input = "${projectDir}/assets/test_gsMetZobe1.yaml"
-    polishing_on = true
     hifiasm_hic_on = true
 }