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Major tidy up of the repository and the website #61

Merged
merged 80 commits into from
Mar 7, 2024
Merged

Major tidy up of the repository and the website #61

merged 80 commits into from
Mar 7, 2024

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muffato
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@muffato muffato commented Feb 29, 2024

TOLIT-1536 - Clean up website repo
TOLIT-1412 - Community page
TOLIT-1478 - Developer docs
TOLIT-790 - Wiki Update

Major tidy up of the repository and the website:

  1. I've removed all unnecessary links to nf-co.re . It's now only linked to specific documentation and pages that are relevant
  2. The "join" button and messages are now "connect to" and link to our social media platforms
  3. I've made me the default assignee of all tickets, rather than Priyanka
  4. I've removed the "rich-codex" integration which was used to generate screenshots of the nf-core CLI for the docs pages
  5. I've removed (almost) all the images and assets that are not used. I've kept a few like Singularity or BioConda that we could probably add back to some new Markdown files in the future
  6. I'm now embedding our team page into the main "about sanger-tol"
  7. I've removed the bytesize events because they were organised by nf-core. I've attended several presentations we've given, and the upcoming 2024 events
  8. I've turned the absolute links to relative ones, so that they work nicely on the dev and prod website independently
  9. I wanted to add all DToL partners, did ENA, and realised it was very tedious, so stopped there :)
  10. Spell check
  11. Merged "projects" and "tools" under "resources", which will at some point include pages about the assembly processes
  12. Imported some content from the wikis https://github.com/sanger-tol/nf-core-modules/wiki and https://github.com/sanger-tol/nf-core-pipeline/wiki

All deployed at http://pipelines.tol-dev.sanger.ac.uk/

@muffato muffato self-assigned this Feb 29, 2024
@muffato muffato added bug Something isn't working enhancement Improvement of the existing features events team genome-after-party Relates to the Genome After Party project labels Feb 29, 2024
@muffato muffato force-pushed the mm49_main branch 3 times, most recently from f00395b to 3ff084f Compare March 1, 2024 00:04
@muffato muffato changed the title [WIP] Major tidy up of the repository and the website Mar 1, 2024
@muffato muffato requested review from gq1 and BethYates March 1, 2024 09:25
@muffato muffato marked this pull request as ready for review March 1, 2024 09:25
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muffato commented Mar 6, 2024

I'll do another round of tidying up the events. I found a few on nf-co.re that I could import. I also want to review their categorisation (talk, tutorial, etc)

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muffato commented Mar 7, 2024

I think I pushed all the events now. I've updated the dev site as well

@muffato muffato merged commit f960a39 into main Mar 7, 2024
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@muffato muffato deleted the mm49_main branch March 7, 2024 16:58
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3 participants