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fix-linting.yml
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109 workflow runs

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Include FASTA parameter, stage REF_CACHE and export REF_PATH Fix linting from a comment #137: Issue comment #138 (comment) created by reichan1998
October 24, 2024 09:20 3s
October 24, 2024 09:20 3s
Implement cram chunking for PacBio and Nanopore Fix linting from a comment #136: Issue comment #130 (comment) created by reichan1998
October 1, 2024 17:29 2s
October 1, 2024 17:29 2s
Calculate mapped vs unmapped read percentages Fix linting from a comment #135: Issue comment #119 (comment) created by tkchafin
October 1, 2024 08:49 2s
October 1, 2024 08:49 2s
Calculate PacBio filtered data percentage Fix linting from a comment #134: Issue comment #71 (comment) created by tkchafin
October 1, 2024 08:45 2s
October 1, 2024 08:45 2s
Implement cram chunking for PacBio and Nanopore Fix linting from a comment #133: Issue comment #130 (comment) created by reichan1998
September 26, 2024 03:15 2s
September 26, 2024 03:15 2s
Patch 1.3.1 Fix linting from a comment #132: Issue comment #128 (comment) created by tkchafin
September 24, 2024 12:36 2s
September 24, 2024 12:36 2s
Docs, CI, copyright update Fix linting from a comment #131: Issue comment #120 (comment) created by tkchafin
September 24, 2024 12:34 2s
September 24, 2024 12:34 2s
Patch 1.3.1 Fix linting from a comment #130: Issue comment #128 (comment) created by tkchafin
September 24, 2024 10:35 3s
September 24, 2024 10:35 3s
Patch 1.3.1 Fix linting from a comment #129: Issue comment #128 (comment) created by tkchafin
September 24, 2024 10:27 2s
September 24, 2024 10:27 2s
Docs, CI, copyright update Fix linting from a comment #128: Issue comment #120 (comment) created by gq1
September 18, 2024 14:23 3s
September 18, 2024 14:23 3s
Docs, CI, copyright update Fix linting from a comment #127: Issue comment #120 (comment) created by muffato
September 17, 2024 20:25 2s
September 17, 2024 20:25 2s
Docs, CI, copyright update Fix linting from a comment #126: Issue comment #120 (comment) created by tkchafin
September 17, 2024 12:52 4s
September 17, 2024 12:52 4s
bwa-mem configuration for HiC Fix linting from a comment #125: Issue comment #118 (comment) created by tkchafin
September 17, 2024 09:28 3s
September 17, 2024 09:28 3s
Implement cram chunking and minimap2-based Hi-C alignments Fix linting from a comment #124: Issue comment #113 (comment) created by tkchafin
September 16, 2024 11:06 3s
September 16, 2024 11:06 3s
bwa-mem configuration for HiC Fix linting from a comment #123: Issue comment #118 (comment) created by tkchafin
September 13, 2024 15:56 3s
September 13, 2024 15:56 3s
bwa-mem configuration for HiC Fix linting from a comment #122: Issue comment #118 (comment) created by yumisims
September 13, 2024 13:57 3s
September 13, 2024 13:57 3s
bwa-mem configuration for HiC Fix linting from a comment #121: Issue comment #118 (comment) created by tkchafin
September 13, 2024 13:22 3s
September 13, 2024 13:22 3s
bwa-mem configuration for HiC Fix linting from a comment #120: Issue comment #118 (comment) created by yumisims
September 13, 2024 13:06 2s
September 13, 2024 13:06 2s
bwa-mem configuration for HiC Fix linting from a comment #119: Issue comment #118 (comment) created by yumisims
September 13, 2024 10:14 3s
September 13, 2024 10:14 3s
bwa-mem configuration for HiC Fix linting from a comment #118: Issue comment #118 (comment) created by tkchafin
September 12, 2024 19:16 3s
September 12, 2024 19:16 3s
bwa-mem configuration for HiC Fix linting from a comment #117: Issue comment #118 (comment) created by muffato
September 12, 2024 16:16 2s
September 12, 2024 16:16 2s
Added branched handling of ULI inputs in filter_pacbio Fix linting from a comment #116: Issue comment #115 (comment) created by tkchafin
September 12, 2024 09:21 3s
September 12, 2024 09:21 3s
Switch to nf-core samtools modules Fix linting from a comment #115: Issue comment #117 (comment) created by tkchafin
September 11, 2024 15:09 3s
September 11, 2024 15:09 3s
Added branched handling of ULI inputs in filter_pacbio Fix linting from a comment #114: Issue comment #115 (comment) created by tkchafin
September 11, 2024 07:06 2s
September 11, 2024 07:06 2s
Implement cram chunking and minimap2-based Hi-C alignments Fix linting from a comment #113: Issue comment #113 (comment) created by muffato
September 10, 2024 20:18 2s
September 10, 2024 20:18 2s