Cleaning up (removing previous code on upgrade)

shpc/client/__init__.py

@@ -332,35 +332,6 @@ def get_parser():
         action="store_true",
     )
 
-    # Upgrade a software to its latest version
-    upgrade = subparsers.add_parser(
-        "upgrade",
-        description=help.upgrade_description,
-        formatter_class=argparse.RawTextHelpFormatter,
-    )
-    upgrade.add_argument(
-        "upgrade_recipe",
-        help="software to upgrade",
-        nargs="?",
-    )
-
-    upgrade.add_argument(
-        "--all",
-        "-a",
-        help="upgrade all installed software.",
-        dest="upgrade_all",
-        action="store_true",
-    )
-
-    upgrade.add_argument(
-        "--force",
-        "-f",
-        dest="force",
-        help="force upgrade without prompting for confirmation to uninstall current version(s) or install latest version to view(s).",
-        default=False,
-        action="store_true",
-    )
-
     # Update gets latest tags from OCI registries
     update = subparsers.add_parser(
         "update",
@@ -414,7 +385,7 @@ def get_parser():
         action="store_true",
     )
 
-    for command in update, upgrade, install, sync:
+    for command in update, install, sync:
         command.add_argument(
             "--dry-run",
             "-d",
@@ -437,7 +408,6 @@ def get_parser():
         shell,
         test,
         uninstall,
-        upgrade,
         view,
     ]:
         command.add_argument(
@@ -585,8 +555,6 @@ def help(return_code=0):
         from .uninstall import main
     elif args.command == "update":
         from .update import main
-    elif args.command == "upgrade":
-        from .upgrade import main
     elif args.command == "sync-registry":
         from .sync import sync_registry as main
 

shpc/client/help.py

@@ -253,36 +253,3 @@
   # Filter all modules to those with "python"
   $ shpc show --filter python
 """
-
-upgrade_description = """Upgrade software to the latest version.
-
-  # Upgrade a software to its latest version and give option to uninstall older versions or not.
-  # Do not include the version in the command
-  $ shpc upgrade quay.io/biocontainers/samtools
-
-  # Upgrade all software
-  $ shpc upgrade --all
-      OR
-  $ shpc upgrade -a
-
-  # Valid arguement combinations:
-  # Perform dry-run on a software to check if the latest is installed or not without upgrading it.
-  $ shpc upgrade quay.io/biocontainers/samtools --dry-run
-      OR
-  $ shpc upgrade quay.io/biocontainers/samtools -d
-
-  # Perform dry-run to show version details of all installed software, to check if the latest version is installed or not without upgrading them.
-  $ shpc upgrade --all --dry-run
-      OR
-  $ shpc upgrade -a -d
-
-  # Invalid arguement combinations:
-  $ shpc upgrade quay.io/biocontainers/samtools --all
-      OR
-  $ shpc upgrade quay.io/biocontainers/samtools -a
-
-  $ shpc upgrade quay.io/biocontainers/samtools --all --dry-run
-      OR
-  $ shpc upgrade quay.io/biocontainers/samtools -a -d
-
-"""

shpc/main/client.py

@@ -62,16 +62,6 @@ def install(self, name, tag=None, **kwargs):
         """
         raise NotImplementedError
 
-    def upgrade(self, name, dryrun=False, force=False):
-        """
-        Upgrade an outdated software
-        """
-        from shpc.client.upgrade import upgrade
-
-        cli = self
-        args = {}
-        upgrade(name, cli, args, dryrun=dryrun, force=force)
-
     def uninstall(self, name, tag=None):
         """
         Uninstall must also implemented by the subclass (e.g., lmod)