Merge branch 'refactor_cli' of github.com:scalableminds/webknossos-li…

…bs into refactor_cli
scalableminds · Aug 8, 2023 · 701ac6b · 701ac6b
2 parents 36eefcf + b9cb5db
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diff --git a/cluster_tools/Changelog.md b/cluster_tools/Changelog.md
@@ -7,7 +7,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/) `MAJOR.MIN
 For upgrade instructions, please check the respective *Breaking Changes* sections.
 
 ## Unreleased
-[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.13.2...HEAD)
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.13.3...HEAD)
 
 ### Breaking Changes
 
@@ -18,6 +18,10 @@ For upgrade instructions, please check the respective *Breaking Changes* section
 ### Fixed
 
 
+## [0.13.3](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.13.3) - 2023-08-08
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.13.2...v0.13.3)
+
+
 ## [0.13.2](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.13.2) - 2023-07-26
 [Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.13.1...v0.13.2)
 

diff --git a/webknossos/Changelog.md b/webknossos/Changelog.md
@@ -10,19 +10,27 @@ and this project adheres to [Semantic Versioning](http://semver.org/) `MAJOR.MIN
 For upgrade instructions, please check the respective _Breaking Changes_ sections.
 
 ## Unreleased
-[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.13.2...HEAD)
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.13.3...HEAD)
 
 ### Breaking Changes
 
+### Added
+
+### Changed
+
+### Fixed
+
+
+## [0.13.3](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.13.3) - 2023-08-08
+[Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.13.2...v0.13.3)
+
 ### Added
 - `View` has a `map_chunk` method now to run a function on each chunk and collect the results in a list.
 
 ### Changed
 - As WEBKNOSSOS does not require the largest segment id. It is also not mandatory in the WEBKNOSSOS libs anymore. [#917](https://github.com/scalableminds/webknossos-libs/issues/917) The method `SegmentationLayer.refresh_largest_segment_id` was added to lookup the highest value in segmentation data and set `largest_segment_id` accordingly.
 - The `convert` command of the cli now has a `--category` flag, to select the LayerCategoryType.
 
-### Fixed
-
 
 ## [0.13.2](https://github.com/scalableminds/webknossos-libs/releases/tag/v0.13.2) - 2023-07-26
 [Commits](https://github.com/scalableminds/webknossos-libs/compare/v0.13.1...v0.13.2)

diff --git a/webknossos/webknossos/dataset/layer.py b/webknossos/webknossos/dataset/layer.py
@@ -420,7 +420,7 @@ def add_mag(
                 ),
                 axis_order=(
                     {"x": 1, "y": 2, "z": 3, "c": 0}
-                    if mag_array_info.data_format == DataFormat.Zarr
+                    if mag_array_info.data_format in (DataFormat.Zarr, DataFormat.Zarr3)
                     else None
                 ),
             )
@@ -457,7 +457,7 @@ def add_mag_for_existing_files(
                 ),
                 axis_order=(
                     {"x": 1, "y": 2, "z": 3, "c": 0}
-                    if mag_array_info.data_format == DataFormat.Zarr
+                    if mag_array_info.data_format in (DataFormat.Zarr, DataFormat.Zarr3)
                     else None
                 ),
             )