Fix doctest

scbirlab · Feb 25, 2024 · 18b13ac · 18b13ac
1 parent f969d3b
commit 18b13ac
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/crispio/map.py b/crispio/map.py
@@ -244,7 +244,7 @@ def as_gff(self,
         Examples
         --------
         >>> genome = "TTTTTTTTTTAAAAAAAAAATGATCGATCGATCGNGGAAAAAAAAAACCCCCCCCCCC"
-        >>> gl = GuideLibrary.from_generating(genome=genome)  # doctest: +SKIP
+        >>> gl = GuideLibrary.from_generating(genome=genome)
         1it [00:00, 2223.92it/s, at_site=34, direction=forward, guides_created=1, pam_sites_found=1]
         3it [00:00, 6397.01it/s, at_site=53, direction=reverse, guides_created=4, pam_sites_found=4]
         >>> for gff in gl.as_gff(gff_defaults=dict(seqid='my_seq', source='here', feature='protospacer')):
@@ -362,7 +362,7 @@ def from_mapping(cls,
         --------
         >>> genome = "TTTTTTTTTTAAAAAAAAAATGATCGATCGATCGNGGAAAAAAAAAACCCCCCCCCCC"
         >>> guide_seq = "ATGATCGATCGATCG"
-        >>> gl = GuideLibrary.from_mapping(guide_seq=guide_seq, genome=genome)  # doctest: +SKIP
+        >>> gl = GuideLibrary.from_mapping(guide_seq=guide_seq, genome=genome) 
         100%|████████████████████████████████████████████████████████| 1/1 [00:00<00:00, 2263.52it/s, current=ATGATCGATCGATCGNGG, not_found=0]
         Not found: 0 guides:
         <BLANKLINE>
@@ -477,7 +477,7 @@ def from_generating(cls,
         Examples
         --------
         >>> genome = "TTTTTTTTTTAAAAAAAAAATGATCGATCGATCGNGGAAAAAAAAAACCCCCCCCCCC"
-        >>> gl = GuideLibrary.from_generating(genome=genome)  # doctest: +SKIP
+        >>> gl = GuideLibrary.from_generating(genome=genome) 
         1it [00:00, 2223.92it/s, at_site=34, direction=forward, guides_created=1, pam_sites_found=1]
         3it [00:00, 6397.01it/s, at_site=53, direction=reverse, guides_created=4, pam_sites_found=4]
         >>> gl.genome