fixing ci pipeline for python3.9 and python3.13 #607
Workflow file for this run
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| name: CI | |
| on: [push, pull_request] | |
| jobs: | |
| build-Windows: | |
| runs-on: windows-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9"] | |
| env: | |
| CONDA_ENV_NAME: "testing_env" | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Install Miniforge | |
| run: | | |
| choco install miniforge3 --yes --force | |
| - name: Add conda to PATH | |
| run: | | |
| echo "$env:CONDA" | Out-File -Append -FilePath $env:GITHUB_PATH | |
| echo "$env:CONDA\Scripts" | Out-File -Append -FilePath $env:GITHUB_PATH | |
| - name: Set up Miniforge | |
| run: | | |
| conda init powershell | |
| gci env:* | sort-object name | |
| conda create --name $env:CONDA_ENV_NAME pip python=${{ matrix.python-version }} | |
| conda install --name $env:CONDA_ENV_NAME -y -c conda-forge -c schrodinger ` | |
| catch2=2.13.3 ` | |
| cxx-compiler ` | |
| collada2gltf ` | |
| freetype ` | |
| glew ` | |
| glm ` | |
| libpng ` | |
| libxml2 ` | |
| libnetcdf ` | |
| libffi | |
| - name: Get additional sources | |
| run: | | |
| git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | |
| Copy-Item -Recurse -Path mmtf-cpp/include/mmtf\* -Destination "$env:CONDA_PREFIX\Library\include" | |
| git clone --depth 1 --single-branch --branch cpp_master https://github.com/msgpack/msgpack-c.git | |
| Copy-Item -Recurse -Path msgpack-c/include/msgpack\* -Destination "$env:CONDA_PREFIX\Library\include" | |
| - name: Build PyMOL | |
| run: | | |
| activate $env:CONDA_ENV_NAME | |
| pip install -v --config-settings testing=True .[dev] | |
| - name: Test | |
| run: | | |
| activate $env:CONDA_ENV_NAME | |
| pymol -ckqy testing\testing.py --run all | |