fixing ci pipeline for python3.9 and python3.13 #614
Workflow file for this run
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name: CI | |
on: [push, pull_request] | |
jobs: | |
build-Windows: | |
runs-on: windows-latest | |
strategy: | |
matrix: | |
python-version: ["3.9"] | |
env: | |
CONDA_ENV_NAME: "testing_env" | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Install Miniforge | |
run: | | |
choco install miniforge3 | |
- name: Add conda to PATH | |
run: | | |
echo "$env:CONDA" | Out-File -Append -FilePath $env:GITHUB_PATH | |
echo "$env:CONDA\Scripts" | Out-File -Append -FilePath $env:GITHUB_PATH | |
- name: Set up Miniforge | |
run: | | |
conda init powershell | |
conda create --name $env:CONDA_ENV_NAME -c conda-forge -c schrodinger ` | |
python=${{ matrix.python-version }} ` | |
pip ` | |
catch2=2.13.3 ` | |
cxx-compiler ` | |
collada2gltf ` | |
freetype ` | |
glew ` | |
glm ` | |
libpng ` | |
libxml2 ` | |
libnetcdf ` | |
libffi | |
- name: Get additional sources | |
run: | | |
conda deactivate | |
conda activate $env:CONDA_ENV_NAME | |
git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | |
Copy-Item -Recurse -Path mmtf-cpp/include/mmtf\* -Destination "$env:CONDA_PREFIX\Library\include" | |
git clone --depth 1 --single-branch --branch cpp_master https://github.com/msgpack/msgpack-c.git | |
Copy-Item -Recurse -Path msgpack-c/include/msgpack\* -Destination "$env:CONDA_PREFIX\Library\include" | |
- name: Build PyMOL | |
run: | | |
conda activate $env:CONDA_ENV_NAME | |
pip install -v --config-settings testing=True .[dev] | |
- name: Test | |
run: | | |
conda activate $env:CONDA_ENV_NAME | |
pymol -ckqy testing\testing.py --run all | |