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cd_hit_py

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Python interface to cd-hit clustering program.

See example for basic commands.

The cd-hit executable files are taken from anaconda. Therefore, this project will work for linux and OSX distributions only.

Run following command to get this project

git clone https://github.com/sdivye92/cd_hit_py.git

Details are avialable in CD-HIT's user guide which is available here. Its copy is also available locally here but this can be outdated.

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Python interface to cd-hit clustering program

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