Skip to content

Navigation Menu

sgkit-dev

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

sgkit-dev

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Popular repositories Loading

sgkit sgkit Public

Scalable genetics toolkit

Python 234 32
bio2zarr bio2zarr Public

Convert bioinformatics file formats to Zarr

Python 27 7
vcf-zarr-spec vcf-zarr-spec Public

VCF Zarr Specification

12 2
sgkit-requirements sgkit-requirements Public

Repo for collecting requirements.

Jupyter Notebook 6 1
sgkit-publication sgkit-publication Public

Sgkit publication repository

TeX 5 5
vcztools vcztools Public

Partial reimplementation of bcftools for VCF Zarr

Python 4 3

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All HTML JavaScript Jupyter Notebook Python TeX

Sort

Select order

Last updated Name Stars

Showing 10 of 14 repositories

vcf-zarr-publication Public
Manuscript and associated scripts for vcf-zarr publication

sgkit-dev/vcf-zarr-publication’s past year of commit activity

TeX 2 8 11 2 Updated Nov 15, 2024
bio2zarr Public
Convert bioinformatics file formats to Zarr

sgkit-dev/bio2zarr’s past year of commit activity

Python 27 Apache-2.0 7 24 (3 issues need help) 3 Updated Nov 11, 2024
sgkit Public
Scalable genetics toolkit

sgkit-dev/sgkit’s past year of commit activity

Python 234 Apache-2.0 32 216 (2 issues need help) 9 Updated Nov 5, 2024
sgkit-benchmarks-asv Public

sgkit-dev/sgkit-benchmarks-asv’s past year of commit activity

JavaScript 0 1 0 0 Updated Nov 5, 2024
vcztools Public
Partial reimplementation of bcftools for VCF Zarr

sgkit-dev/vcztools’s past year of commit activity

Python 4 Apache-2.0 3 15 1 Updated Nov 4, 2024
vcf-zarr-spec Public
VCF Zarr Specification

sgkit-dev/vcf-zarr-spec’s past year of commit activity

12 Apache-2.0 2 23 0 Updated Jul 29, 2024
hypothesis-vcf Public
Hypothesis strategy for generating VCF

sgkit-dev/hypothesis-vcf’s past year of commit activity

Python 1 Apache-2.0 0 0 0 Updated Jul 18, 2024
sgkit-publication Public
Sgkit publication repository

sgkit-dev/sgkit-publication’s past year of commit activity

TeX 5 5 19 0 Updated Mar 6, 2024
sgkit-publication-backup Public Forked from sgkit-dev/sgkit-publication
Backup of sgkit publication repository, original manubot version

sgkit-dev/sgkit-publication-backup’s past year of commit activity

HTML 0 5 0 0 Updated Feb 27, 2023
sgkit-bgen Public archive
NOW ARCHIVED! BGEN IO implementations for sgkit. With https://github.com/pystatgen/sgkit/issues/65, now maintained and developed in the sgkit repo.

sgkit-dev/sgkit-bgen’s past year of commit activity

Python 0 Apache-2.0 3 12 0 Updated Oct 6, 2020

View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…

Footer

© 2024 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.