command-line-bio

New workshop on using command-line for Bioinformatics

Amazon details

• ami-0f9124f7452cdb2a6

ubuntu/images/hvm-ssd/ubuntu-bionic-18.04-amd64-server-20211129
ami-0f9124f7452cdb2a6

-t2.large 2vCPU 8Gb memory

• Storage - Volume 1 (Template and AMI Root) 13Gb
• Advanced Data (User data)
• Default security group

#!/bin/bash

sudo apt-get update
sudo apt-get install -y docker.io
sudo service docker start
sudo usermod -aG docker $username
sudo docker pull sheffieldbioinformatics/unix-training
docker run -v --rm -d -p 5901:5901 -p 6901:6901 --privileged sheffieldbioinformatics/unix-training