correct directory

nbs/08_AUCDF.ipynb

@@ -24,16 +24,6 @@
     "## Setup"
    ]
   },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "id": "3b193b4f-d1f5-4b1d-abd3-435f38b97693",
-   "metadata": {},
-   "outputs": [],
-   "source": [
-    "# !pip install git+https://github.com/sky1ove/katlas.git -Uqq"
-   ]
-  },
   {
    "cell_type": "code",
    "execution_count": null,
@@ -103,7 +93,7 @@
     "# with open('raw/kinase_map.pkl', 'wb') as file:\n",
     "#     pickle.dump(kinase_map, file)\n",
     "    \n",
-    "# with open('kinase_map.pkl', 'rb') as file:\n",
+    "# with open('raw/kinase_map.pkl', 'rb') as file:\n",
     "#     loaded_dict = pickle.load(file)"
    ]
   },
@@ -330,18 +320,6 @@
     "We also notice that the kinase name in 'KINASE' column is not always consistent (e.g., gene name and protein name are mixed in some cases), so we need to convert the kinase name to a consistent name."
    ]
   },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "id": "462d7448-2d85-4416-93f3-77f8be6e603b",
-   "metadata": {},
-   "outputs": [],
-   "source": [
-    "# # load kinase map\n",
-    "# with open('kinase_map.pkl','rb') as f:\n",
-    "#     kinase_map = pickle.load(f)"
-   ]
-  },
   {
    "cell_type": "code",
    "execution_count": null,