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v0.1 - 2020/02/17
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@guilhermesena1 guilhermesena1 released this 17 Feb 20:19
· 577 commits to master since this release
v0.1
5ff8626

This is a frozen stable version of abismal. Some of the improvements to be incorporated in the next release are:

  • Aligning PE reads in the select_maps function for all candidate concordant pairs
  • Adjust the AbismalAlign.hpp class so it does not adjust the table size dynamically, but rather takes the longest read of a batch to know the memory requirement in advance.
  • Decide on ambiguity based on a function of alignment score of first and second best matches.
  • Allow for scores to be user-defined in options?
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