v0.2 - 2019/11/26
Changes in version 0.2:
- Fixed several problems in per tile sequence quality. Visualization in the html report also shows the y axis in heatmap as categorical instead of numeric.
- Fixed bugs in adapter content. We now give an exact percentage of adapters in each position, and output is consistent with FastQC.
- Base groups in per base sequence quality are more consistent with FastQC. We now use linear base groups instead of exponential base groups from previous version.
- Added a
-B
or--bisulfite
flag, not included in fastqc, to test for Whole Genome Bisulfite Sequencing data. When the-B
flag is raised, per base sequence content will only compare A with G and (A+T) with (G+C) as pass/warn/fail criteria. It will also display two extra columns in the text output with A+T and G+C percentages for each base position. - Added a
-v
or--version
flag similar to FastQC, which simply prints the program version.