Skip to content

Issues: ssi-dk/bifrost

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

33 Open 22 Closed
33 Open 22 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Documentation link at readme.md yields a 404
#85 opened Oct 12, 2022 by KasperThystrup
QC score
#80 opened Apr 20, 2021 by finngl
@kriskiil
4
Requirements not passed failing the component 🐛 bug Something isn't working
#77 opened Nov 16, 2020 by martinbaste
@martinbaste
Adjust sample_component path to include final path not just sample path
#75 opened Sep 22, 2020 by kimleeng
push newest bifrostlib to all components
#71 opened Sep 17, 2020 by kimleeng
Split tests into fast and slow (or unit/integration) so that the watchdog runs quick ones first and then bigger ones after for faster feedback loops 🤖 automation
#68 opened Aug 6, 2020 by kimleeng
Update tests with new bifrostlib functionality 📲 api for api development 🤖 automation 💾 data schemes for DB schema development
#67 opened Aug 5, 2020 by kimleeng
Update bifrostlib for samplecomponents to reflect schema2.0 and beyond, right now its more hardcoded for snakemake purposes 📲 api for api development 💾 data schemes for DB schema development
#66 opened Aug 4, 2020 by kimleeng
Add input species for components with a species requirement. This is so if the user changes the species the component still has info on which species it ran against 💪 enhancement New feature or request 🔨 pipelines Related to pipeline development
#65 opened Aug 4, 2020 by kimleeng
Download finders result for selected samples as csv 🏞 dashboard for UI
#64 opened Jul 28, 2020 by martinbaste
Columns can be added/hidden by the user 🏞 dashboard for UI
#63 opened Jul 28, 2020 by martinbaste
Fix setup to install indexes for DB and species install. 🗄 database Issues related to the database
#59 opened Jul 2, 2020 by kimleeng
Add old azure devops CI/CD into github actions 🤖 automation
#57 opened Jul 2, 2020 by kimleeng
1
Mountable output folder for docker images 💪 enhancement New feature or request
#54 opened Jun 30, 2020 by kimleeng
Convert user feedback into a sample component 🔨 pipelines Related to pipeline development
#48 opened Jun 19, 2020 by kimleeng
Generate requirements for a validation set 💪 enhancement New feature or request 👾 other
#47 opened Jun 19, 2020 by kimleeng
Look into anonymization mappings for fields 💾 data schemes for DB schema development 🤗 data sharing on how we share backend data 💪 enhancement New feature or request
#46 opened Jun 19, 2020 by kimleeng
1
Add a interface for managing species and there mappings 🏞 dashboard for UI 💪 enhancement New feature or request
#45 opened Jun 19, 2020 by kimleeng
Port over non public components for schema 2.0 💥 invalid This doesn't seem right 🔨 pipelines Related to pipeline development
#42 opened Jun 19, 2020 by kimleeng
Unify classes and api for different DB requests and api into one location 📲 api for api development 💪 enhancement New feature or request
#41 opened Jun 19, 2020 by kimleeng
Add loading bars/spinners to data tables if possible 🏞 dashboard for UI 💪 enhancement New feature or request
#40 opened Jun 19, 2020 by kimleeng
Look into showing contigs/coverage in a more intuitive way 🏞 dashboard for UI 💪 enhancement New feature or request
#39 opened Jun 19, 2020 by kimleeng
Change data plots for QC to show a pregenerated density plot 🏞 dashboard for UI 💪 enhancement New feature or request
#38 opened Jun 19, 2020 by kimleeng
1
Adjust docker images to utilize a scratch folder 💪 enhancement New feature or request 🖥 server for issues related to a particular server
#37 opened Jun 19, 2020 by kimleeng
1
Adjust components to have a unique name based on name, version, db_date 💾 data schemes for DB schema development 💪 enhancement New feature or request
#36 opened Jun 19, 2020 by kimleeng
ProTip! Updated in the last three days: updated:>2024-11-13.