update

ssi-dk · Nov 13, 2024 · b2223ef · b2223ef
1 parent acbb470
commit b2223ef
Showing 1 changed file with 4 additions and 3 deletions.
diff --git a/.github/workflows/bifrost_sp_ecoli_workflow.yml b/.github/workflows/bifrost_sp_ecoli_workflow.yml
@@ -66,7 +66,7 @@ jobs:
       # Step 5: Build Docker image
       - name: Build docker image
         run: |
-          docker build --build-arg BUILD_ENV=test -t ${{ github.event.repository.name }} .
+          docker build --build-arg BIFROST_DB_KEY="${{ secrets.MONGODB_ATLAS_CONNECTION }}" --build-arg CONDA_ENV_NAME="${{ env.ENV_NAME }}" -t bifrost_sp_ecoli_image .
       
       - name: Get_tests_data
         run: |
@@ -84,6 +84,7 @@ jobs:
         run: |
           docker run \ 
           -v /home/runner/work/${{ github.event.repository.name }}/${{ github.event.repository.name }}/bifrost_test_data:/bifrost/test_data \
-          -e BIFROST_DB_KEY=${{ secrets.MONGODB_ATLAS_CONNECTION }}/bifrost_test \
-          ${{ github.event.repository.name }} \
+          --env BIFROST_DB_KEY=${{ secrets.MONGODB_ATLAS_CONNECTION }} \
+          --env CONDA_ENV_NAME="${{ env.ENV_NAME }}" \
+          bifrost_sp_ecoli_image \
           -m pytest