Crawl #16

	name: Crawl

	on:
	workflow_dispatch:
	schedule:
	- cron: "0 2 * * 5"

	jobs:
	crawl:
	runs-on: ubuntu-latest
	steps:
	- name: Set up R
	uses: r-lib/actions/setup-r@v2

	- name: Install packages
	uses: r-lib/actions/setup-r-dependencies@v2
	with:
	packages: \|
	any::httr
	any::jsonlite

	- name: Check out repository
	uses: actions/checkout@v4
	with:
	path: main_folder
	ref: main

	- name: Create and populate credentials file with secrets
	working-directory: ./main_folder
	run: \|
	echo 'scopus_apikey="'"$MAPPED_SCOPUS_APIKEY"'"' >> credentials.R
	echo 'scopus_insttoken="'"$MAPPED_SCOPUS_INSTTOKEN"'"' >> credentials.R
	echo 'openai_apikey="'"$MAPPED_OPENAI_APIKEY"'"' >> credentials.R
	echo 'crossref_email="'"$MAPPED_CROSSREF_EMAIL"'"' >> credentials.R
	shell: bash
	env:
	MAPPED_SCOPUS_APIKEY: ${{ secrets.SCOPUS_APIKEY }}
	MAPPED_SCOPUS_INSTTOKEN : ${{ secrets.SCOPUS_INSTTOKEN }}
	MAPPED_OPENAI_APIKEY : ${{ secrets.OPENAI_APIKEY }}
	MAPPED_CROSSREF_EMAIL : ${{ secrets.CROSSREF_EMAIL }}

	- name: Get data and produce JSON
	working-directory: ./main_folder
	run: \|
	: # Rscript crawl.R "politics"
	: # Rscript crawl.R "economics"
	: # Rscript crawl.R "sociology"
	Rscript crawl.R "multidisciplinary"
	: # Rscript crawl.R "migration"

	- name: Commit results main branch
	working-directory: ./main_folder
	run: \|
	git config --local user.email "[email protected]"
	git config --local user.name "GitHub Actions"
	git add . && git commit -m "Data updated"
	git push origin

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