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Merge pull request #8 from sys-bio/require-reactionGlyphIndex
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Require the 'reactionGlyphIndex' argument.
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@adelhpour
adelhpour authored Nov 20, 2024
2 parents 6cfb63e + 051dc84 commit 0bffa49
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Showing 3 changed files with 1 addition and 218 deletions.
2 changes: 1 addition & 1 deletion .github/workflows/build.yml
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Expand Up @@ -10,7 +10,7 @@ on:

jobs:
build_on_OSs:
name: Build RoadRunner on ${{ matrix.platform.name }}-python${{ matrix.python_version }}
name: Build SBMLNetwork on ${{ matrix.platform.name }}-python${{ matrix.python_version }}
strategy:
fail-fast: false
matrix:
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65 changes: 0 additions & 65 deletions src/libsbmlnetwork_sbmldocument_layout.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -596,14 +596,6 @@ double getSpeciesReferenceCurveSegmentStartPointX(SBMLDocument* document, unsign
return getCurveSegmentStartPointX(getSpeciesReference(getLayout(document, layoutIndex), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex);
}

int setSpeciesReferenceCurveSegmentStartPointX(SBMLDocument* document, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentStartPointX(getSpeciesReference(getLayout(document), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, x);
}

int setSpeciesReferenceCurveSegmentStartPointX(SBMLDocument* document, unsigned int layoutIndex, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentStartPointX(getSpeciesReference(getLayout(document, layoutIndex), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, x);
}

int setSpeciesReferenceCurveSegmentStartPointX(SBMLDocument* document, const std::string& reactionId, unsigned int reactionGlyphIndex, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentStartPointX(getSpeciesReference(getLayout(document), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex, x);
}
Expand All @@ -620,14 +612,6 @@ double getSpeciesReferenceCurveSegmentStartPointY(SBMLDocument* document, unsign
return getCurveSegmentStartPointY(getSpeciesReference(getLayout(document, layoutIndex), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex);
}

int setSpeciesReferenceCurveSegmentStartPointY(SBMLDocument* document, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentStartPointY(getSpeciesReference(getLayout(document), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, y);
}

int setSpeciesReferenceCurveSegmentStartPointY(SBMLDocument* document, unsigned int layoutIndex, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentStartPointY(getSpeciesReference(getLayout(document, layoutIndex), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, y);
}

int setSpeciesReferenceCurveSegmentStartPointY(SBMLDocument* document, const std::string& reactionId, unsigned int reactionGlyphIndex, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentStartPointY(getSpeciesReference(getLayout(document), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex, y);
}
Expand All @@ -644,15 +628,6 @@ double getSpeciesReferenceCurveSegmentEndPointX(SBMLDocument* document, unsigned
return getCurveSegmentEndPointX(getSpeciesReference(getLayout(document, layoutIndex), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex);
}

int setSpeciesReferenceCurveSegmentEndPointX(SBMLDocument* document, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentEndPointX(getSpeciesReference(getLayout(document), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, x);
}

int setSpeciesReferenceCurveSegmentEndPointX(SBMLDocument* document, unsigned int layoutIndex, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentEndPointX(getSpeciesReference(getLayout(document, layoutIndex), reactionId, 0, speciesReferenceIndex),
curveSegmentIndex, x);
}

int setSpeciesReferenceCurveSegmentEndPointX(SBMLDocument* document, const std::string& reactionId, unsigned int reactionGlyphIndex, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentEndPointX(getSpeciesReference(getLayout(document), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex, x);
}
Expand All @@ -669,14 +644,6 @@ double getSpeciesReferenceCurveSegmentEndPointY(SBMLDocument* document, unsigned
return getCurveSegmentEndPointY(getSpeciesReference(getLayout(document, layoutIndex), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex);
}

int setSpeciesReferenceCurveSegmentEndPointY(SBMLDocument* document, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentEndPointY(getSpeciesReference(getLayout(document), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, y);
}

int setSpeciesReferenceCurveSegmentEndPointY(SBMLDocument* document, unsigned int layoutIndex, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentEndPointY(getSpeciesReference(getLayout(document, layoutIndex), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, y);
}

int setSpeciesReferenceCurveSegmentEndPointY(SBMLDocument* document, const std::string& reactionId, unsigned int reactionGlyphIndex, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentEndPointY(getSpeciesReference(getLayout(document), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex, y);
}
Expand All @@ -693,14 +660,6 @@ double getSpeciesReferenceCurveSegmentBasePoint1X(SBMLDocument* document, unsign
return getCurveSegmentBasePoint1X(getSpeciesReference(getLayout(document, layoutIndex), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex);
}

int setSpeciesReferenceCurveSegmentBasePoint1X(SBMLDocument* document, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentBasePoint1X(getSpeciesReference(getLayout(document), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, x);
}

int setSpeciesReferenceCurveSegmentBasePoint1X(SBMLDocument* document, unsigned int layoutIndex, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentBasePoint1X(getSpeciesReference(getLayout(document, layoutIndex), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, x);
}

int setSpeciesReferenceCurveSegmentBasePoint1X(SBMLDocument* document, const std::string& reactionId, unsigned int reactionGlyphIndex, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentBasePoint1X(getSpeciesReference(getLayout(document), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex, x);
}
Expand All @@ -717,14 +676,6 @@ double getSpeciesReferenceCurveSegmentBasePoint1Y(SBMLDocument* document, unsign
return getCurveSegmentBasePoint1Y(getSpeciesReference(getLayout(document, layoutIndex), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex);
}

int setSpeciesReferenceCurveSegmentBasePoint1Y(SBMLDocument* document, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentBasePoint1Y(getSpeciesReference(getLayout(document), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, y);
}

int setSpeciesReferenceCurveSegmentBasePoint1Y(SBMLDocument* document, unsigned int layoutIndex, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentBasePoint1Y(getSpeciesReference(getLayout(document, layoutIndex), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, y);
}

int setSpeciesReferenceCurveSegmentBasePoint1Y(SBMLDocument* document, const std::string& reactionId, unsigned int reactionGlyphIndex, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentBasePoint1Y(getSpeciesReference(getLayout(document), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex, y);
}
Expand All @@ -741,14 +692,6 @@ double getSpeciesReferenceCurveSegmentBasePoint2X(SBMLDocument* document, unsign
return getCurveSegmentBasePoint2X(getSpeciesReference(getLayout(document, layoutIndex), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex);
}

int setSpeciesReferenceCurveSegmentBasePoint2X(SBMLDocument* document, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentBasePoint2X(getSpeciesReference(getLayout(document), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, x);
}

int setSpeciesReferenceCurveSegmentBasePoint2X(SBMLDocument* document, unsigned int layoutIndex, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentBasePoint2X(getSpeciesReference(getLayout(document, layoutIndex), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, x);
}

int setSpeciesReferenceCurveSegmentBasePoint2X(SBMLDocument* document, const std::string& reactionId, unsigned int reactionGlyphIndex, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& x) {
return setCurveSegmentBasePoint2X(getSpeciesReference(getLayout(document), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex, x);
}
Expand All @@ -765,14 +708,6 @@ double getSpeciesReferenceCurveSegmentBasePoint2Y(SBMLDocument* document, unsign
return getCurveSegmentBasePoint2Y(getSpeciesReference(getLayout(document, layoutIndex), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex);
}

int setSpeciesReferenceCurveSegmentBasePoint2Y(SBMLDocument* document, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentBasePoint2Y(getSpeciesReference(getLayout(document), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, y);
}

int setSpeciesReferenceCurveSegmentBasePoint2Y(SBMLDocument* document, unsigned int layoutIndex, const std::string& reactionId, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentBasePoint2Y(getSpeciesReference(getLayout(document, layoutIndex), reactionId, 0, speciesReferenceIndex), curveSegmentIndex, y);
}

int setSpeciesReferenceCurveSegmentBasePoint2Y(SBMLDocument* document, const std::string& reactionId, unsigned int reactionGlyphIndex, unsigned int speciesReferenceIndex, unsigned int curveSegmentIndex, const double& y) {
return setCurveSegmentBasePoint2Y(getSpeciesReference(getLayout(document), reactionId, reactionGlyphIndex, speciesReferenceIndex), curveSegmentIndex, y);
}
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