fixed typos

DESCRIPTION

@@ -53,7 +53,7 @@ Remotes:
     tanaylab/prego
 Config/testthat/edition: 3
 Encoding: UTF-8
-Language: es
+Language: en-US
 Roxygen: list(markdown = TRUE)
 RoxygenNote: 7.3.2
 Config/Needs/website: rmarkdown

R/prego.R

@@ -1,6 +1,6 @@
 #' Learn 'prego' models for ATAC difference of a trajectory
 #'
-#' @param peak_intervals A data frame, indicating the genomic positions ('chrom', 'start', 'end') of each peak, with an additional column named "const" indicating whether the peak is constitutive and therefiore shouldn't be used in the regression. Optionally, a column named "cluster" can be added with indication of the cluster of each peak.
+#' @param peak_intervals A data frame, indicating the genomic positions ('chrom', 'start', 'end') of each peak, with an additional column named "const" indicating whether the peak is constitutive and therefore shouldn't be used in the regression. Optionally, a column named "cluster" can be added with indication of the cluster of each peak.
 #' @param atac_diff A numeric vector, indicating the ATAC difference of each peak
 #' @param n_motifs Number of motifs to learn. Should be at least 2
 #' @param min_diff Minimum ATAC difference to include a peak in the training

vignettes/articles/iceqream.Rmd

@@ -167,7 +167,7 @@ The model report provides several key pieces of information (from left to right)
 2. Response curves show how the accessibility changes as a function of binding energy for each TF.
 3. Barplots show the coefficient of each non-linear term of every motif in the model.
 4. Spatial model curves show the parameters of the spatial model for each TF. The R² values indicate the predictive power each TF adds to the model.
-5. Spatial curves show the frequencey of each TF binding site along the peaks from the bottom 10% (blue) and top 10% (red) of the differential accessibility (dAP) distribution.
+5. Spatial curves show the frequency of each TF binding site along the peaks from the bottom 10% (blue) and top 10% (red) of the differential accessibility (dAP) distribution.
 6. Boxplots show the distribution of ATAC differences (dAP, y-axis) for bins of binding energy (x-axis) for each TF.
 
 ## Renaming the motif models