Geoio provides facilities to easily interact with geospatial data. The interactions that are supported include data retrieval, spectral processing, metadata handling, shapefile intersection/extraction, and retrieval of statistical information. Specific attention has been paid to accessing DigitalGlobe data and metadata, but the same facilities in this module can be used to access non-DigitalGlobe data or to build custom processing and metadata handling for other satellite platforms.
pip install geoio
Dependencies will be handled at install if possible. GDAL is not cleanly
installable via pip so should be handled separately (conda, yum, apt-get, etc.).
The run dependencies are: gdal, xmltodict, pytz, tzwhere, ephem, numpy, tinytools
.
Additionally, dgsamples
is required for testing and matplotlib
must be
available for the plotting functions to work.
Note for MAC users: if pip fails for ephem, try installing it directly with conda within the conda virtual environment, i.e.:
conda install ephem
import geoio
imports the main classes GeoImage
and DGImage
to the module root.
The GeoImage
class is a relatively thin wrapper around gdal that provides a
pythonic interface for accessing an arbitrary geospatial image format
(generally those supported by gdal plus the DigitalGlobe .TIL format).
Operations supported include reading, writing, chipping, reprojecting, and meta
data access. The class methods are populated with reasonable defaults and
object interfaces, making image operations less painful so that you can get on
with the important stuff!
The DGImage
class inherits all the capabilites of GeoImage
and adds
DigitalGlobe meta data handling, spectral processing, and band alias data
retrieval. Therefore, it requires that the input image be a valid DigitalGlobe
image. This is currently either a .TIL file with the associated meta data files
(.IMD and/or .XML) present in the image directory or a .TIF files with an
identially named .IMD or .XML file. The metadata is read into an
OrderedBunch
object (inherited from the tinytools package) attached to the
instantiated object.
The geoio classes are best used interactively from within ipython where the relevant pretty print methods can be triggered. Meta data information will be reutrned regardless of the interpreter, but the readability is currently much better in ipython.
The dgsamples repo is used below. However, all the operations below can be
run on local data by replacing the dgsamples call with a string to the image
location. From exmaples, instead of typing `dgsamples.wv2_longmont_1k.ms`
,
a local files at `/path/to/imgfile.TIF`
can be used.
Using the GeoImage object:
import dgsamples
# Instantiate an image object
img = geoio.GeoImage(dgsamples.bayou_chip.extract_test) # a TIF file
# Print useful information about the object
img.files
img.meta
# Get numpy array
data = img.get_data()
# Process data and write to new image
newdata = data*2
img.write_img_like_this('/path/to/newfile.TIF',newdata)
Using the DGImage object:
import dgsamples
# Instantiate an image object
img = geoio.DGImage(dgsamples.wv2_longmont_1k.ms) # a TIL file
# Can also be used directly with a DigitalGlobe TIF file if an XML and/or IMD
# is available with same name as the TIF file.
# Print useful information about the object
img.files
img.meta
# Print the full IMD OrderedBunch object
img.meta_dg.IMD # tab completeable through the OrderedBunch
# Return an ImgArr (a numpy array with band meta data handling)
data = img.get_data()
# Convert an ImgArr to a pure numpy array
npdata = np.asarray(data)
# Return a pure numpy array
data = img.get_data(meta=False)
# Get specific bands using aliases - see geoio.constants.DG_BAND_ALIASES for
# additional aliases.
data = img.get_data(bands='VIS')
# Get specific bands using band aliases
data = img.get_data(bands=['C','Y'])
# Get image data and convert to TOA reflectance
data = img.get_data(stype='toa')
Plotting with the geoio.plotting
functions:
import dgsamples
# Instantiate an image object
img = geoio.DGImage(dgsamples.wv2_longmont_1k.ms) # a TIF file
# Plot the RGB image
geoio.plotting.imshow(img.get_data(bands='RGB'))
# Plot the near-infrared false color image
geoio.plotting.imshow(img.get_data(bands=['N1','G','B']))
# Plotting a histogram of the image bands
geoio.plotting.hist(img.get_data())
# Plotting a histogram of specific bands
geoio.plotting.hist(img.get_data(bands='VIS'))
The geoio module has upsampling and downsmapling code that allows the user to easily resample two images to the same grid for easy multi-image proceesing.
import dgsamples
# Import wv3 images
ms = geoio.DGImage(dgsamples.wv3_longmont_1k.ms)
swir = geoio.DGImage(dgsamples.wv3_longmont_1k.swir)
# Upsample the swir image
swir.upsample_like_that(ms,method='nearest') # default method is bilinear
# Downsample the ms image
ms.downsample_like_that(swir) # default method is aggregation
# Or let geoio figure it out
ms.resample_like_that(swir)
swir.resample_like_that(ms)
The geoio module also provides several iterators to allow easy access to yield based portions of a raster file.
import dgsamples
ms = geoio.DGImage(dgsamples.wv2_longmont_1k.ms)
# iterate through vector geometries
v = dgsamples.wv2_longmont_1k_vectors.poly_geojson_latlon
[x for x in ms.iter_vector(vector=v,bands='RGB',mask=True)]
# random windows from the image
[x.shape for x in ms.iter_window_random(win_size=[10,10], no_chips=20)]
# iterate through image with evenly spaced windows based on requested stride
[x.shape for x in ms.iter_window(win_size=[10,10], stride=[100,100])