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[WIP] Diffuse#29

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tjlane wants to merge 40 commits intomastertjlane/thor:masterfrom diffusetjlane/thor:diffuseCopy head branch name to clipboard

+1,677-60

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Commits on Feb 22, 2017

• draft of diffuse

  tjlane

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  61b3432

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• benchmark

  tjlane

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  0dbda81

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• retab

  tjlane

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• updated readme

  

  Ariana Peck

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Commits on Feb 23, 2017

• python interface sketch in and works

  tjlane

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• adding reference V matrices

  

  Ariana Peck

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• removing test commit

  

  Ariana Peck

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• updated test_scatter.py

  

  Ariana Peck

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Commits on Feb 24, 2017

• functional ref implementation; cpp_scatter_diffuse fails for nonzero V

  

  Ariana Peck

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• python reference implementation added

  

  apeck12

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Commits on Feb 28, 2017

• Merge pull request #31 from apeck12/diffuse

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• cpp implementation works, tests in

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Commits on Mar 6, 2017

• revised ref. implementation

  

  Ariana Peck

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• updated reference implementation

  

  Ariana Peck

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• Merge pull request #32 from apeck12/diffuse

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• Merge branch 'diffuse' of github.com:tjlane/thor into diffuse

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Commits on Mar 7, 2017

• Diffuse tests workin

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Commits on Mar 8, 2017

• cleaned up tests

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• skipping correlate_intra for now...

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Commits on Mar 9, 2017

• skip all intra tests

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• speed improved

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• gpu first draft (probably totally broken, need machine w nvcc)

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• gpu code.... works?git status

  

  TJ Lane

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• try and skip if no gpu

  

  TJ Lane

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Commits on Mar 11, 2017

• retab

  

  TJ Lane

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• tpb 128 -> 256

  

  TJ Lane

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Commits on May 10, 2017

• added vMF distribution

  tjlane

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Commits on Oct 16, 2017

• Merge branch 'master' into diffuse

  tjlane

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Commits on Nov 28, 2017

• added B factor reference implementation

  

  Ariana Peck

  committed
  66bdb9c

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• added reference implementation for B factors

  

  Ariana Peck

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  b416342

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• added python reference implementation for b-factors

  

  Ariana Peck

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Commits on Nov 29, 2017

• added python reference implementation for b-factors

  

  Ariana Peck

  committed
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• added python reference implementation for b-factors

  

  Ariana Peck

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Commits on Nov 30, 2017

• B-factors implemented and functioning for CPU

  

  Ariana Peck

  committed
  6b57f4c

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Commits on Dec 1, 2017

• added tests of updated CppScatter Python interface

  

  Ariana Peck

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• revised nosetests; now passes GPU tests

  

  Ariana Peck

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• updated error messages

  

  Ariana Peck

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Commits on Dec 3, 2017

• center finding bug

  tjlane

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• added meaningless benchmark test

  tjlane

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Commits on Dec 6, 2017

• Merge pull request #35 from tjlane/apeck12-diffuse

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  apeck12

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