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@trenchproject

TRanslating ENvironmental CHange

We build computational and visualization tools to translate environmental change into organismal responses.

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  1. TrenchR TrenchR Public

    an R package for transparent environmental and ecological biophysics

    R 13 7

  2. Trench-IR Trench-IR Public

    Thermal image conversion, storage, and education resources to further understanding of how organisms experience their environment

    CSS 1

  3. TrenchRmodules TrenchRmodules Public

    Physical processes in ecosystems: Educational modules introducing biophysical ecology and use of the TrEnChR package.

    HTML

  4. R-Docker-Server R-Docker-Server Public template

    Assorted shell scripts and dockerfiles for a containerized RShiny/RStudio deployment strategy.

    Shell 1

  5. MicroclimMarkdown MicroclimMarkdown Public

    A users' guide to microclimate data for environmental and ecological biophysics. R Markdown text for a bookdown site with resources for accessing microclimate datasets. Within chapters correspondin…

    TeX

  6. RShiny_Microclim RShiny_Microclim Public

    An interactive shiny app that facilitates the selection of microclimate data by offering spatial and temporal data comparisons.

    HTML

Repositories

Showing 10 of 27 repositories
  • ButterflyThermalTraits Public

    Automating analysis of butterfly thermal traits from images of museum specimens

    trenchproject/ButterflyThermalTraits’s past year of commit activity
    R 0 0 3 0 Updated Jan 23, 2025
  • RShiny_PlantPhenology Public

    PlantPhenology is an interactive shiny app that allows any user to visualize the phenological shifts in plant species in response to climate change.

    trenchproject/RShiny_PlantPhenology’s past year of commit activity
    R 0 0 0 0 Updated Jul 2, 2024
  • Rshiny_ButterflyMuseumSpecimens Public

    ButterflyMuseumSpecimens is an interactive shiny app that allows any user to visualize the relationship between temperature and butterflies' morphology and physiology taken from museum specimens.

    trenchproject/Rshiny_ButterflyMuseumSpecimens’s past year of commit activity
    R 1 1 0 0 Updated Jul 2, 2024
  • RShiny_ButterflyHeatBudget Public

    This interactive shiny app allows user to explore how organisms exchange heat with their environments. We focus on an energy balance that predicts the body temperatures of a montane butterfly.

    trenchproject/RShiny_ButterflyHeatBudget’s past year of commit activity
    R 0 0 0 0 Updated Jul 2, 2024
  • RShiny_Robomussels Public

    Rshiny_robomussels is an interactive shiny app that allows any user to visualize the operative temperatures of mussels on a microclimatic scale.

    trenchproject/RShiny_Robomussels’s past year of commit activity
    R 0 0 0 0 Updated Jul 2, 2024
  • RShiny_RangeShifts Public

    RangeShifts is an interactive shiny app that allows any user to visualize the effects of climate change on marine species range shifts.

    trenchproject/RShiny_RangeShifts’s past year of commit activity
    R 0 0 0 0 Updated Jul 2, 2024
  • RShiny_RMBL-phenology Public

    RShiny_RMBL-phenology is an interactive shiny app that allows any user to visualize the relationships between climatic variables and phenology of hibernating species, migratory species, and some plant species.

    trenchproject/RShiny_RMBL-phenology’s past year of commit activity
    R 1 0 0 0 Updated Jul 2, 2024
  • Climate-Change-Metabolism Public

    A Shiny visualization of Climate Change and its effect on the energy use of ectotherms.

    trenchproject/Climate-Change-Metabolism’s past year of commit activity
    R 1 0 3 0 Updated Jul 2, 2024
  • TrenchR Public

    an R package for transparent environmental and ecological biophysics

    trenchproject/TrenchR’s past year of commit activity
    R 13 7 2 0 Updated Sep 29, 2023
  • ESA_MechModelWorkshop Public

    Rmd files for ESA workshop on mechanistic niche modeling

    trenchproject/ESA_MechModelWorkshop’s past year of commit activity
    HTML 0 1 0 0 Updated Aug 6, 2023
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