Include pertussis in pathogen lineup. Fixes #21.

trvrb · Jul 24, 2017 · 26709ed · 26709ed
1 parent 0b45b49
commit 26709ed
Show file tree

Hide file tree

Showing 7 changed files with 25 additions and 0 deletions.
diff --git a/lineup/README.md b/lineup/README.md
@@ -5,6 +5,7 @@
 * [HIV](hiv/)
 * [Malaria](malaria/)
 * [Norovirus](norovirus/)
+* [Pertussis](pertussis/)
 * [Pneumococcus](pneumo/)
 * [Rotavirus](rotavirus/)
 * [Swine flu](swine-flu/)
diff --git a/lineup/pertussis/README.md b/lineup/pertussis/README.md
@@ -0,0 +1,24 @@
+# Pertussis
+
+![](pertussis.jpg)
+
+### Introduction
+
+* [Wikipedia: Bordetella pertussis](https://en.wikipedia.org/wiki/Bordetella_pertussis)
+
+### Important features
+
+* [Pertussis vaccine](https://en.wikipedia.org/wiki/Pertussis_vaccine). Is there vaccine-driven selection?
+
+### Serology
+
+* Figs 5 and 6 in [McGirr et al. 2015](mcgirr-pertussis-serology.pdf)
+
+### Timeseries
+
+* Figs 1 and 2 in [de Celles et al. 2017](deCelles-pertussis-timeseries)
+
+### Genetics
+
+* Table 2 in [Mooi et al. 1998](mooi-pertussis-genetics.pdf)
+* Figs 1 and 2 in [Bart et al. 2014](bart-pertussis-genetics.pdf)
diff --git a/lineup/pertussis/bart-pertussis-genetics.pdf b/lineup/pertussis/bart-pertussis-genetics.pdf
diff --git a/lineup/pertussis/deCelles-pertussis-timeseries.pdf b/lineup/pertussis/deCelles-pertussis-timeseries.pdf
diff --git a/lineup/pertussis/mcgirr-pertussis-serology.pdf b/lineup/pertussis/mcgirr-pertussis-serology.pdf
diff --git a/lineup/pertussis/mooi-pertussis-genetics.pdf b/lineup/pertussis/mooi-pertussis-genetics.pdf
diff --git a/lineup/pertussis/pertussis.jpg b/lineup/pertussis/pertussis.jpg