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Preserving ID of reads for reverse-complement #1

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Preserving ID of reads for reverse-complement #1

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4 changes: 2 additions & 2 deletions DecombinatorFunctionsV2_2.py
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Original file line number Diff line number Diff line change
Expand Up @@ -211,7 +211,7 @@ def analysis( inputfile, outputfile, with_reverse_complement_search, species, ch
## REVERSE COMPLEMENT
#####################

record_reverse = record.reverse_complement()
record_reverse = record.reverse_complement(id=True)

if (chain == "alpha") or (chain == "all"):

Expand Down Expand Up @@ -993,4 +993,4 @@ def get_translated_sequences( handle, handle_results, chain, species, with_outfr
print >> write_to, elements + ', ' + cdr3

handle.close()
write_to.close()
write_to.close()