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Add support for Gaea C5 (includes PR #1977: new ccpp SDFs added to su…
…pport RRFS multiphysics ensemble and add tob in ocean output)(Includes PR #1997) (#1784) * Reinstate all the c5 changes that I botched with my git ignorance. * Update ufs_common. Upate c5 modulefile. * TPN adjustments for C5 regional_atmaq tests. * Remove set -eu from module-setup.sh * Update rt.sh adding new DISKNM for Gaea_C5 * updates for gaea-c5 modulefiles, scripts * Update rt.conf fix gaea machine name
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Submodule FV3
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6 files
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| set(PARALLEL_NETCDF ON CACHE BOOL "Enable parallel NetCDF" FORCE) | ||
| set(MOM6_Extra_FORTRAN_FLAGS "-xsse2") | ||
| set(HYCOM_Extra_FORTRAN_FLAGS "-xSSE4.2") | ||
| set(HYCOM_Extra_C_FLAGS "-xSSE4.2") |
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| help([[ | ||
| This module loads libraries required for building and running UFS Weather Model | ||
| on the NOAA RDHPC machine Gaea C5 using Intel-2023.1.0. | ||
| ]]) | ||
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| whatis([===[Loads libraries needed for building the UFS Weather Model on Gaea C5 ]===]) | ||
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| load("PrgEnv-intel/8.3.3") | ||
| load("intel-classic/2023.1.0") | ||
| load("cray-mpich/8.1.25") | ||
| load("python/3.9.12") | ||
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| prepend_path("MODULEPATH", "/lustre/f2/dev/wpo/role.epic/contrib/spack-stack/c5/spack-stack-1.5.0/envs/unified-env/install/modulefiles/Core") | ||
| prepend_path("MODULEPATH", "/lustre/f2/dev/wpo/role.epic/contrib/spack-stack/c5/modulefiles") | ||
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| stack_intel_ver=os.getenv("stack_intel_ver") or "2023.1.0" | ||
| load(pathJoin("stack-intel", stack_intel_ver)) | ||
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| stack_cray_mpich_ver=os.getenv("stack_cray_mpich_ver") or "8.1.25" | ||
| load(pathJoin("stack-cray-mpich", stack_cray_mpich_ver)) | ||
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| stack_python_ver=os.getenv("stack_python_ver") or "3.10.8" | ||
| load(pathJoin("stack-python", stack_python_ver)) | ||
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| load("ufs_common") | ||
| load("nccmp/1.9.0.1") | ||
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| unload("darshan-runtime") | ||
| unload("cray-libsci") | ||
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| setenv("CC","cc") | ||
| setenv("CXX","CC") | ||
| setenv("FC","ftn") | ||
| setenv("CMAKE_Platform","gaea-c5.intel") |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,21 @@ | ||
| #!/bin/bash -l | ||
| #SBATCH -e err | ||
| #SBATCH -o out | ||
| #SBATCH --account=@[ACCNR] | ||
| ##SBATCH --qos=@[QUEUE] | ||
| #SBATCH --clusters=es | ||
| #SBATCH --partition=eslogin_c5 | ||
| #SBATCH --nodes=1 | ||
| #SBATCH --ntasks-per-node=8 | ||
| #SBATCH --time=180 | ||
| #SBATCH --job-name="@[JBNME]" | ||
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| set -eux | ||
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| echo -n " $( date +%s )," > job_timestamp.txt | ||
| echo "Compile started: " `date` | ||
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| @[PATHRT]/compile.sh @[MACHINE_ID] "@[MAKE_OPT]" @[COMPILE_NR] @[RT_COMPILER] | ||
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| echo "Compile ended: " `date` | ||
| echo -n " $( date +%s )," >> job_timestamp.txt |
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| @@ -0,0 +1,38 @@ | ||
| #!/bin/bash -l | ||
| #SBATCH -e err | ||
| #SBATCH -o out | ||
| #SBATCH --job-name="@[JBNME]" | ||
| #SBATCH --account=@[ACCNR] | ||
| #SBATCH --qos=@[QUEUE] | ||
| #SBATCH --clusters=c5 | ||
| #SBATCH --partition=batch | ||
| #SBATCH --nodes=@[NODES] | ||
| #SBATCH --ntasks-per-node=@[TPN] | ||
| #SBATCH --time=@[WLCLK] | ||
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| set -eux | ||
| echo -n " $( date +%s )," > job_timestamp.txt | ||
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| set +x | ||
| MACHINE_ID=gaea-c5 | ||
| source ./module-setup.sh | ||
| module use --prepend $PWD/modulefiles | ||
| module load modules.fv3 | ||
| module list | ||
| set -x | ||
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| echo "Model started: " `date` | ||
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| export OMP_NUM_THREADS=@[THRD] | ||
| export OMP_STACKSIZE=1024M | ||
| export NC_BLKSZ=1M | ||
| export ESMF_RUNTIME_PROFILE=ON | ||
| export ESMF_RUNTIME_PROFILE_OUTPUT="SUMMARY" | ||
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| # Avoid job errors because of filesystem synchronization delays | ||
| sync && sleep 1 | ||
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| srun --label -n @[TASKS] ./fv3.exe | ||
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| echo "Model ended: " `date` | ||
| echo -n " $( date +%s )," >> job_timestamp.txt |
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