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Fix tree node check states not being updated
This commit fixes a bug where the check states of tree nodes were not correctly updated upon selecting predefined groups like "Standard", "Strict", "None" and "All". It resolves the issue by manually triggering of updates for mutated array containing selected scripts. It enhances test coverage to prevent regression and verify the correct behavior of state updates. This bug was introduced in commit 4995e49, which optimized reactivity by removing deep state tracking. the reactivity optimization reduced the deep state tracking.
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