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Documenter.jl committed Jan 14, 2025
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2 changes: 1 addition & 1 deletion dev/.documenter-siteinfo.json
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{"documenter":{"julia_version":"1.11.2","generation_timestamp":"2025-01-14T11:43:27","documenter_version":"1.8.0"}}
{"documenter":{"julia_version":"1.11.2","generation_timestamp":"2025-01-14T14:36:24","documenter_version":"1.8.0"}}
28 changes: 14 additions & 14 deletions dev/api/index.html
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2 changes: 1 addition & 1 deletion dev/generated/explanations/positions/index.html
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f = Figure(size = (600, 300))
scatter(f[1, 1], pos3d[1:2, :], axis = (title = "Dropping third dimension",))
scatter(f[1, 2], pos2, axis = (title = "Projection form 3D to 2D",))
f</code></pre><img src="b4d5c598.png" alt="Example block output"/><p>As you can see, the &quot;naive&quot; transformation of simply dropping the third dimension does not really work (left). Instead, we have to project the channels onto a sphere and unfold it (right).</p><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../how_to/mult_vis_in_fig/">« Include multiple figures in one</a><a class="docs-footer-nextpage" href="../../../api/">API / DocStrings »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Tuesday 14 January 2025 11:43">Tuesday 14 January 2025</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
f</code></pre><img src="b4d5c598.png" alt="Example block output"/><p>As you can see, the &quot;naive&quot; transformation of simply dropping the third dimension does not really work (left). Instead, we have to project the channels onto a sphere and unfold it (right).</p><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../how_to/mult_vis_in_fig/">« Include multiple figures in one</a><a class="docs-footer-nextpage" href="../../../api/">API / DocStrings »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Tuesday 14 January 2025 14:36">Tuesday 14 January 2025</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
2 changes: 1 addition & 1 deletion dev/generated/how_to/hide_deco/index.html
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data[:, 340, 1];
positions = positions,
layout = (; hidespines = nothing, hidedecorations = nothing),
)</code></pre><img src="560df3e5.png" alt="Example block output"/><p>For more information on the input of these functions refer to the <a href="https://makie.juliaplots.org/v0.15.2/examples/layoutables/axis/#hiding_axis_spines_and_decorations">Makie dokumentation on Axis.</a></p><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../position2color/">« Change colormap of Butterfly plot</a><a class="docs-footer-nextpage" href="../mult_vis_in_fig/">Include multiple figures in one »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Tuesday 14 January 2025 11:43">Tuesday 14 January 2025</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
)</code></pre><img src="560df3e5.png" alt="Example block output"/><p>For more information on the input of these functions refer to the <a href="https://makie.juliaplots.org/v0.15.2/examples/layoutables/axis/#hiding_axis_spines_and_decorations">Makie dokumentation on Axis.</a></p><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../position2color/">« Change colormap of Butterfly plot</a><a class="docs-footer-nextpage" href="../mult_vis_in_fig/">Include multiple figures in one »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Tuesday 14 January 2025 14:36">Tuesday 14 January 2025</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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4 changes: 2 additions & 2 deletions dev/generated/how_to/mult_vis_in_fig/index.html
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uf_5chan = example_data(&quot;UnfoldLinearModelMultiChannel&quot;)
data, positions = TopoPlots.example_data()
dat_e, evts, times = example_data(&quot;sort_data&quot;)
d_singletrial, _ = UnfoldSim.predef_eeg(; return_epoched = true)</code></pre><pre class="documenter-example-output"><code class="nohighlight hljs ansi">Progress: 4%|█▉ | ETA: 0:00:09Progress: 100%|█████████████████████████████████████████| Time: 0:00:00</code></pre><h1 id="Basic-complex-figure"><a class="docs-heading-anchor" href="#Basic-complex-figure">Basic complex figure</a><a id="Basic-complex-figure-1"></a><a class="docs-heading-anchor-permalink" href="#Basic-complex-figure" title="Permalink"></a></h1><p>By using the !-version of the plotting function and inserting a grid position instead of an entire figure, we can create complex plot combining several figures. We will start by creating a figure with <code>Makie.Figure</code>.</p><p><code>f = Figure()</code></p><p>Now any plot can be added to <code>f</code> by placing a grid position, such as <code>f[1, 1]</code>. Also we used a specified theme <code>fresh</code>.</p><pre><code class="language-julia hljs">f = Figure()
d_singletrial, _ = UnfoldSim.predef_eeg(; return_epoched = true)</code></pre><pre class="documenter-example-output"><code class="nohighlight hljs ansi">Progress: 4%|█▉ | ETA: 0:00:07Progress: 100%|█████████████████████████████████████████| Time: 0:00:00</code></pre><h1 id="Basic-complex-figure"><a class="docs-heading-anchor" href="#Basic-complex-figure">Basic complex figure</a><a id="Basic-complex-figure-1"></a><a class="docs-heading-anchor-permalink" href="#Basic-complex-figure" title="Permalink"></a></h1><p>By using the !-version of the plotting function and inserting a grid position instead of an entire figure, we can create complex plot combining several figures. We will start by creating a figure with <code>Makie.Figure</code>.</p><p><code>f = Figure()</code></p><p>Now any plot can be added to <code>f</code> by placing a grid position, such as <code>f[1, 1]</code>. Also we used a specified theme <code>fresh</code>.</p><pre><code class="language-julia hljs">f = Figure()
with_theme(theme_ggthemr(:fresh)) do

plot_erp!(f[1, 1], coeftable(uf_deconv))
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padding = (20, 20, 22, 0),
halign = :right,
)
end</code></pre></details ><pre><code class="language-julia hljs">f</code></pre><img src="116cd45f.png" alt="Example block output"/><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../hide_deco/">« Hide decorations and axis spines</a><a class="docs-footer-nextpage" href="../../explanations/positions/">Convert electrode positions from 3D to 2D »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Tuesday 14 January 2025 11:43">Tuesday 14 January 2025</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
end</code></pre></details ><pre><code class="language-julia hljs">f</code></pre><img src="cb11c730.png" alt="Example block output"/><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../hide_deco/">« Hide decorations and axis spines</a><a class="docs-footer-nextpage" href="../../explanations/positions/">Convert electrode positions from 3D to 2D »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Tuesday 14 January 2025 14:36">Tuesday 14 January 2025</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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positions = positions,
topopositions_to_color = x -&gt; (GrayA(UnfoldMakie.pos_to_color_RomaO(x), 0.5)),
)
f</code></pre><img src="9e070d63.png" alt="Example block output"/><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../tutorials/splines/">« Spline plot</a><a class="docs-footer-nextpage" href="../hide_deco/">Hide decorations and axis spines »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Tuesday 14 January 2025 11:43">Tuesday 14 January 2025</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
f</code></pre><img src="9e070d63.png" alt="Example block output"/><hr/><p><em>This page was generated using <a href="https://github.com/fredrikekre/Literate.jl">Literate.jl</a>.</em></p></article><nav class="docs-footer"><a class="docs-footer-prevpage" href="../../tutorials/splines/">« Spline plot</a><a class="docs-footer-nextpage" href="../hide_deco/">Hide decorations and axis spines »</a><div class="flexbox-break"></div><p class="footer-message">Powered by <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> and the <a href="https://julialang.org/">Julia Programming Language</a>.</p></nav></div><div class="modal" id="documenter-settings"><div class="modal-background"></div><div class="modal-card"><header class="modal-card-head"><p class="modal-card-title">Settings</p><button class="delete"></button></header><section class="modal-card-body"><p><label class="label">Theme</label><div class="select"><select id="documenter-themepicker"><option value="auto">Automatic (OS)</option><option value="documenter-light">documenter-light</option><option value="documenter-dark">documenter-dark</option><option value="catppuccin-latte">catppuccin-latte</option><option value="catppuccin-frappe">catppuccin-frappe</option><option value="catppuccin-macchiato">catppuccin-macchiato</option><option value="catppuccin-mocha">catppuccin-mocha</option></select></div></p><hr/><p>This document was generated with <a href="https://github.com/JuliaDocs/Documenter.jl">Documenter.jl</a> version 1.8.0 on <span class="colophon-date" title="Tuesday 14 January 2025 14:36">Tuesday 14 January 2025</span>. Using Julia version 1.11.2.</p></section><footer class="modal-card-foot"></footer></div></div></div></body></html>
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