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Merge pull request #623 from cthoyt/platforms
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Add `VO:0005505` - vaccine for platform
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@zhengj2007
zhengj2007 authored Nov 16, 2023
2 parents 8986c49 + 8fac9f7 commit 96425bb
Showing 1 changed file with 24 additions and 12 deletions.
36 changes: 24 additions & 12 deletions src/VO.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -2494,7 +2494,7 @@ Reference: http://www.violinet.org/vaxquery/vaccine_detail.php?c_vaccine_id=157&
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000623"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
Expand Down Expand Up @@ -6501,7 +6501,7 @@ MUTATION: An isogenic sodC mutant constructed from B abortus 2308 by gene replac
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000728"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<obo:IAO_0000115>A vaccine that uses RNA(s) derived from a pathogen organism.</obo:IAO_0000115>
<obo:IAO_0000116>Using RNA may eliminate the problem of having to tailor a vaccine for each individual patient with their specific immunity. The advantage of RNA is that it can be used for all immunity types and can be taken from a single cell. DNA vaccines need to produce RNA which then prompts the manufacture of proteins. However, RNA vaccine eliminates the step from DNA to RNA.</obo:IAO_0000116>
<obo:IAO_0000117>Oliver He</obo:IAO_0000117>
Expand Down Expand Up @@ -6562,7 +6562,7 @@ MUTATION: An isogenic sodC mutant constructed from B abortus 2308 by gene replac
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000625"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
Expand Down Expand Up @@ -8278,7 +8278,7 @@ Ref: Hadler TC, et al. Immunization in developing countries. In: Vaccines. Edito
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000211"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000086"/>
Expand Down Expand Up @@ -9167,7 +9167,7 @@ Ref: Hadler TC, et al. Immunization in developing countries. In: Vaccines. Edito
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000173"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<obo:IAO_0000115>A live vaccine that is made from microbes that have been attenuated (weakened) in the laboratory so that they can&apos;t cause disease.</obo:IAO_0000115>
<obo:IAO_0000117>YH</obo:IAO_0000117>
<obo:IAO_0000118>attenuated vaccine</obo:IAO_0000118>
Expand Down Expand Up @@ -9202,7 +9202,7 @@ Ref: Hadler TC, et al. Immunization in developing countries. In: Vaccines. Edito
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000612"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<obo:IAO_0000117>YH</obo:IAO_0000117>
<rdfs:label>live virulent vaccine</rdfs:label>
</owl:Class>
Expand Down Expand Up @@ -11049,7 +11049,7 @@ VE = (p-c)/p(1-c) x 100%.</obo:IAO_0000115>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000636"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/BFO_0000051"/>
Expand Down Expand Up @@ -11778,7 +11778,7 @@ Artificial active immunization is where the microbe, or parts of it, are injecte
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000624"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<obo:IAO_0000115>A vaccine that is composed of a purified protein(s) or other antigenic determinant(s) from a disease-causing organism. A subunit vaccine does not include pathogen nucleic acids. The subunits have less risk of causing adverse reactions.</obo:IAO_0000115>
<obo:IAO_0000117>YH</obo:IAO_0000117>
<rdfs:label>subunit vaccine</rdfs:label>
Expand Down Expand Up @@ -12141,7 +12141,7 @@ Toxins can be small molecules, peptides, or proteins that are capable of causing
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0000807"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
Expand Down Expand Up @@ -12777,7 +12777,7 @@ The best way to determine if a vaccine is effective is to test it in a randomize
<!-- http://purl.obolibrary.org/obo/VO_0000598 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/VO_0000598">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
Expand Down Expand Up @@ -102255,7 +102255,7 @@ Empty Parent Term</obo:VO_0003198>
<owl:someValuesFrom rdf:resource="http://purl.obolibrary.org/obo/VO_0004913"/>
</owl:Restriction>
</owl:equivalentClass>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<rdfs:subClassOf>
<owl:Restriction>
<owl:onProperty rdf:resource="http://purl.obolibrary.org/obo/RO_0000087"/>
Expand Down Expand Up @@ -109739,7 +109739,7 @@ Empty Parent Term</obo:VO_0003198>
<!-- http://purl.obolibrary.org/obo/VO_0005439 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/VO_0005439">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0005505"/>
<obo:IAO_0000115>Passive vaccine is a vaccine that is made of immune globulin and used to immulize an individual against some dieases.</obo:IAO_0000115>
<rdfs:label>passive vaccine</rdfs:label>
</owl:Class>
Expand Down Expand Up @@ -110501,6 +110501,18 @@ administered prior to exposure or within two weeks after exposure.</obo:IAO_0000



<!-- http://purl.obolibrary.org/obo/VO_0005505 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/VO_0005505">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/VO_0000001"/>
<obo:IAO_0000115>a grouping class for vaccines for specific platforms</obo:IAO_0000115>
<dc:contributor rdf:resource="https://orcid.org/0000-0003-4423-4370"/>
<oboInOwl:hasExactSynonym>vaccine for platform</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">vaccine by platform type</rdfs:label>
</owl:Class>



<!-- http://purl.obolibrary.org/obo/VO_0005800 -->

<owl:Class rdf:about="http://purl.obolibrary.org/obo/VO_0005800">
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