Merge pull request #19 from vib-singlecell-nf/develop

Fix container urls and update to version 0.10.0
vib-singlecell-nf · Mar 10, 2020 · be6a35f · be6a35f
2 parents 6c72536 + 82e9384
commit be6a35f
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diff --git a/conf/append.config b/conf/append.config
@@ -2,6 +2,7 @@
 params {
     sc {
         scenic {
+            container = 'aertslab/pyscenic:0.10.0'
             report_ipynb = '/src/scenic/bin/reports/scenic_report.ipynb'
             existingScenicLoom = ''
             sampleSuffixWithExtension = '' // Suffix after the sample name in the file path

diff --git a/conf/multi_runs.config b/conf/multi_runs.config
@@ -1,6 +1,7 @@
 params {
     sc {
         scenic {
+            container = 'aertslab/pyscenic:0.10.0'
             numRuns = 2
             // AUCell parameters
             aucell {

diff --git a/conf/test_multi_runs.config b/conf/test_multi_runs.config
@@ -1,6 +1,7 @@
 params {
     sc {
         scenic {
+            container = 'aertslab/pyscenic:0.10.0'
             numRuns = 2
             // AUCell parameters
             aucell {