Skip to content

Commit

Permalink
Documentation Update for votca/votca@1a1ded7
Browse files Browse the repository at this point in the history
  • Loading branch information
votca-bot committed Sep 29, 2023
1 parent d506d38 commit b9f4001
Show file tree
Hide file tree
Showing 29 changed files with 13,215 additions and 13,215 deletions.
Binary file modified .doctrees/environment.pickle
Binary file not shown.
94 changes: 47 additions & 47 deletions .doctrees/nbsphinx/xtp-tutorials/DFTGWBSE_ENERGY.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -43,10 +43,10 @@
"execution_count": 1,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:12.205064Z",
"iopub.status.busy": "2023-09-22T05:19:12.204557Z",
"iopub.status.idle": "2023-09-22T05:19:12.353169Z",
"shell.execute_reply": "2023-09-22T05:19:12.352129Z"
"iopub.execute_input": "2023-09-29T05:22:24.009990Z",
"iopub.status.busy": "2023-09-29T05:22:24.009590Z",
"iopub.status.idle": "2023-09-29T05:22:24.147609Z",
"shell.execute_reply": "2023-09-29T05:22:24.146637Z"
}
},
"outputs": [
Expand All @@ -60,7 +60,7 @@
"\r\n",
"please submit bugs to https://github.com/votca/votca/issues\r\n",
"\r\n",
"xtp_tools, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 22 2023, 05:15:39)\r\n",
"xtp_tools, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 29 2023, 05:17:09)\r\n",
"\r\n",
"Runs excitation/charge transport tools\r\n",
"\r\n",
Expand Down Expand Up @@ -110,10 +110,10 @@
"execution_count": 2,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:12.357884Z",
"iopub.status.busy": "2023-09-22T05:19:12.357471Z",
"iopub.status.idle": "2023-09-22T05:19:21.949594Z",
"shell.execute_reply": "2023-09-22T05:19:21.947577Z"
"iopub.execute_input": "2023-09-29T05:22:24.153819Z",
"iopub.status.busy": "2023-09-29T05:22:24.153584Z",
"iopub.status.idle": "2023-09-29T05:22:31.978880Z",
"shell.execute_reply": "2023-09-29T05:22:31.977846Z"
}
},
"outputs": [],
Expand Down Expand Up @@ -141,10 +141,10 @@
"execution_count": 3,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:21.956525Z",
"iopub.status.busy": "2023-09-22T05:19:21.955994Z",
"iopub.status.idle": "2023-09-22T05:19:22.209799Z",
"shell.execute_reply": "2023-09-22T05:19:22.208848Z"
"iopub.execute_input": "2023-09-29T05:22:31.984612Z",
"iopub.status.busy": "2023-09-29T05:22:31.983996Z",
"iopub.status.idle": "2023-09-29T05:22:32.230581Z",
"shell.execute_reply": "2023-09-29T05:22:32.229752Z"
}
},
"outputs": [
Expand Down Expand Up @@ -174,10 +174,10 @@
"execution_count": 4,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:22.214713Z",
"iopub.status.busy": "2023-09-22T05:19:22.214438Z",
"iopub.status.idle": "2023-09-22T05:19:22.339826Z",
"shell.execute_reply": "2023-09-22T05:19:22.332387Z"
"iopub.execute_input": "2023-09-29T05:22:32.234936Z",
"iopub.status.busy": "2023-09-29T05:22:32.234343Z",
"iopub.status.idle": "2023-09-29T05:22:32.352872Z",
"shell.execute_reply": "2023-09-29T05:22:32.351660Z"
}
},
"outputs": [
Expand Down Expand Up @@ -221,10 +221,10 @@
"execution_count": 5,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:22.345211Z",
"iopub.status.busy": "2023-09-22T05:19:22.344707Z",
"iopub.status.idle": "2023-09-22T05:19:22.462717Z",
"shell.execute_reply": "2023-09-22T05:19:22.461393Z"
"iopub.execute_input": "2023-09-29T05:22:32.357446Z",
"iopub.status.busy": "2023-09-29T05:22:32.357007Z",
"iopub.status.idle": "2023-09-29T05:22:32.472109Z",
"shell.execute_reply": "2023-09-29T05:22:32.470876Z"
}
},
"outputs": [
Expand Down Expand Up @@ -253,10 +253,10 @@
"execution_count": 6,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:22.469646Z",
"iopub.status.busy": "2023-09-22T05:19:22.469103Z",
"iopub.status.idle": "2023-09-22T05:19:30.782147Z",
"shell.execute_reply": "2023-09-22T05:19:30.781088Z"
"iopub.execute_input": "2023-09-29T05:22:32.476777Z",
"iopub.status.busy": "2023-09-29T05:22:32.476152Z",
"iopub.status.idle": "2023-09-29T05:22:39.422662Z",
"shell.execute_reply": "2023-09-29T05:22:39.421611Z"
}
},
"outputs": [],
Expand Down Expand Up @@ -284,10 +284,10 @@
"execution_count": 7,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:30.789705Z",
"iopub.status.busy": "2023-09-22T05:19:30.788859Z",
"iopub.status.idle": "2023-09-22T05:19:33.678755Z",
"shell.execute_reply": "2023-09-22T05:19:33.677569Z"
"iopub.execute_input": "2023-09-29T05:22:39.427152Z",
"iopub.status.busy": "2023-09-29T05:22:39.426585Z",
"iopub.status.idle": "2023-09-29T05:22:41.832809Z",
"shell.execute_reply": "2023-09-29T05:22:41.831984Z"
}
},
"outputs": [
Expand All @@ -301,17 +301,17 @@
"\r\n",
"please submit bugs to https://github.com/votca/votca/issues\r\n",
"\r\n",
"xtp_tools, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 22 2023, 05:15:39)\r\n",
"xtp_tools, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 29 2023, 05:17:09)\r\n",
"\r\n",
"Initializing tool\r\n",
"... partialcharges Evaluating tool\r\n",
"... partialcharges Using 1 threads\r\n",
"... ... Loading QM data from methane.orb\r\n",
"... ... ===== Running on 1 threads ===== \r\n",
"... ... 2023-9-22 5:19:31 Calculated Densities at Numerical Grid, Number of electrons is -2.37461e-08\r\n",
"... ... 2023-9-22 5:19:31 Calculating ESP at CHELPG grid points\r\n",
"... ... 2023-9-22 5:19:33 Netcharge constrained to 0\r\n",
"... ... Sum of fitted charges: 2.41265e-14\r\n",
"... ... 2023-9-29 5:22:39 Calculated Densities at Numerical Grid, Number of electrons is -2.37461e-08\r\n",
"... ... 2023-9-29 5:22:39 Calculating ESP at CHELPG grid points\r\n",
"... ... 2023-9-29 5:22:41 Netcharge constrained to 0\r\n",
"... ... Sum of fitted charges: 2.42618e-14\r\n",
"... ... RMSE of fit: 0.00221585\r\n",
"... ... RRMSE of fit: 0.107179\r\n",
"... ... El Dipole from fitted charges [e*bohr]:\r\n",
Expand Down Expand Up @@ -339,10 +339,10 @@
"execution_count": 8,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:33.685202Z",
"iopub.status.busy": "2023-09-22T05:19:33.684743Z",
"iopub.status.idle": "2023-09-22T05:19:33.834087Z",
"shell.execute_reply": "2023-09-22T05:19:33.832900Z"
"iopub.execute_input": "2023-09-29T05:22:41.837575Z",
"iopub.status.busy": "2023-09-29T05:22:41.837137Z",
"iopub.status.idle": "2023-09-29T05:22:41.981089Z",
"shell.execute_reply": "2023-09-29T05:22:41.980302Z"
}
},
"outputs": [
Expand All @@ -356,7 +356,7 @@
"\r\n",
"please submit bugs to https://github.com/votca/votca/issues\r\n",
"\r\n",
"xtp_tools, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 22 2023, 05:15:39)\r\n",
"xtp_tools, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 29 2023, 05:17:09)\r\n",
"\r\n",
"Initializing tool\r\n",
"... spectrum Evaluating tool\r\n",
Expand Down Expand Up @@ -398,10 +398,10 @@
"execution_count": 9,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:33.841091Z",
"iopub.status.busy": "2023-09-22T05:19:33.840402Z",
"iopub.status.idle": "2023-09-22T05:19:36.672919Z",
"shell.execute_reply": "2023-09-22T05:19:36.671554Z"
"iopub.execute_input": "2023-09-29T05:22:41.986141Z",
"iopub.status.busy": "2023-09-29T05:22:41.985619Z",
"iopub.status.idle": "2023-09-29T05:22:44.464880Z",
"shell.execute_reply": "2023-09-29T05:22:44.464092Z"
}
},
"outputs": [
Expand Down Expand Up @@ -436,10 +436,10 @@
"execution_count": 10,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:36.678006Z",
"iopub.status.busy": "2023-09-22T05:19:36.677748Z",
"iopub.status.idle": "2023-09-22T05:19:38.532991Z",
"shell.execute_reply": "2023-09-22T05:19:38.531985Z"
"iopub.execute_input": "2023-09-29T05:22:44.469880Z",
"iopub.status.busy": "2023-09-29T05:22:44.469294Z",
"iopub.status.idle": "2023-09-29T05:22:46.522723Z",
"shell.execute_reply": "2023-09-29T05:22:46.522118Z"
}
},
"outputs": [
Expand Down
62 changes: 31 additions & 31 deletions .doctrees/nbsphinx/xtp-tutorials/LAMMPS_KMC.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -35,10 +35,10 @@
"execution_count": 1,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:41.629538Z",
"iopub.status.busy": "2023-09-22T05:19:41.629107Z",
"iopub.status.idle": "2023-09-22T05:19:43.981229Z",
"shell.execute_reply": "2023-09-22T05:19:43.980298Z"
"iopub.execute_input": "2023-09-29T05:22:49.014059Z",
"iopub.status.busy": "2023-09-29T05:22:49.013422Z",
"iopub.status.idle": "2023-09-29T05:22:50.998922Z",
"shell.execute_reply": "2023-09-29T05:22:50.997715Z"
}
},
"outputs": [
Expand Down Expand Up @@ -91,10 +91,10 @@
"execution_count": 2,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:43.987547Z",
"iopub.status.busy": "2023-09-22T05:19:43.986716Z",
"iopub.status.idle": "2023-09-22T05:19:45.493682Z",
"shell.execute_reply": "2023-09-22T05:19:45.492618Z"
"iopub.execute_input": "2023-09-29T05:22:51.004790Z",
"iopub.status.busy": "2023-09-29T05:22:51.004553Z",
"iopub.status.idle": "2023-09-29T05:22:52.312112Z",
"shell.execute_reply": "2023-09-29T05:22:52.310768Z"
}
},
"outputs": [
Expand All @@ -108,7 +108,7 @@
"\r\n",
"please submit bugs to https://github.com/votca/votca/issues\r\n",
"\r\n",
"xtp_run, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 22 2023, 05:15:39)\r\n",
"xtp_run, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 29 2023, 05:17:09)\r\n",
"\r\n",
"Initializing calculator\r\n",
"... eanalyze\r\n",
Expand Down Expand Up @@ -146,10 +146,10 @@
"execution_count": 3,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:45.498815Z",
"iopub.status.busy": "2023-09-22T05:19:45.498379Z",
"iopub.status.idle": "2023-09-22T05:19:45.618125Z",
"shell.execute_reply": "2023-09-22T05:19:45.616557Z"
"iopub.execute_input": "2023-09-29T05:22:52.316684Z",
"iopub.status.busy": "2023-09-29T05:22:52.316124Z",
"iopub.status.idle": "2023-09-29T05:22:52.432543Z",
"shell.execute_reply": "2023-09-29T05:22:52.431685Z"
}
},
"outputs": [
Expand Down Expand Up @@ -183,10 +183,10 @@
"execution_count": 4,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:45.626633Z",
"iopub.status.busy": "2023-09-22T05:19:45.626114Z",
"iopub.status.idle": "2023-09-22T05:19:47.344842Z",
"shell.execute_reply": "2023-09-22T05:19:47.344268Z"
"iopub.execute_input": "2023-09-29T05:22:52.437402Z",
"iopub.status.busy": "2023-09-29T05:22:52.436959Z",
"iopub.status.idle": "2023-09-29T05:22:53.909698Z",
"shell.execute_reply": "2023-09-29T05:22:53.909087Z"
}
},
"outputs": [
Expand Down Expand Up @@ -234,10 +234,10 @@
"execution_count": 5,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:47.349983Z",
"iopub.status.busy": "2023-09-22T05:19:47.348616Z",
"iopub.status.idle": "2023-09-22T05:19:48.754445Z",
"shell.execute_reply": "2023-09-22T05:19:48.753100Z"
"iopub.execute_input": "2023-09-29T05:22:53.914374Z",
"iopub.status.busy": "2023-09-29T05:22:53.913262Z",
"iopub.status.idle": "2023-09-29T05:22:55.071425Z",
"shell.execute_reply": "2023-09-29T05:22:55.070640Z"
}
},
"outputs": [
Expand All @@ -251,7 +251,7 @@
"\r\n",
"please submit bugs to https://github.com/votca/votca/issues\r\n",
"\r\n",
"xtp_run, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 22 2023, 05:15:39)\r\n",
"xtp_run, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 29 2023, 05:17:09)\r\n",
"\r\n",
"Initializing calculator\r\n",
"... ianalyze\r\n",
Expand Down Expand Up @@ -285,10 +285,10 @@
"execution_count": 6,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:48.760814Z",
"iopub.status.busy": "2023-09-22T05:19:48.760534Z",
"iopub.status.idle": "2023-09-22T05:19:48.911404Z",
"shell.execute_reply": "2023-09-22T05:19:48.910677Z"
"iopub.execute_input": "2023-09-29T05:22:55.075790Z",
"iopub.status.busy": "2023-09-29T05:22:55.075262Z",
"iopub.status.idle": "2023-09-29T05:22:55.195900Z",
"shell.execute_reply": "2023-09-29T05:22:55.194694Z"
}
},
"outputs": [
Expand Down Expand Up @@ -323,10 +323,10 @@
"execution_count": 7,
"metadata": {
"execution": {
"iopub.execute_input": "2023-09-22T05:19:48.915786Z",
"iopub.status.busy": "2023-09-22T05:19:48.915176Z",
"iopub.status.idle": "2023-09-22T05:19:50.297025Z",
"shell.execute_reply": "2023-09-22T05:19:50.295880Z"
"iopub.execute_input": "2023-09-29T05:22:55.199311Z",
"iopub.status.busy": "2023-09-29T05:22:55.198801Z",
"iopub.status.idle": "2023-09-29T05:22:56.334562Z",
"shell.execute_reply": "2023-09-29T05:22:56.333701Z"
}
},
"outputs": [
Expand All @@ -340,7 +340,7 @@
"\r\n",
"please submit bugs to https://github.com/votca/votca/issues\r\n",
"\r\n",
"xtp_run, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 22 2023, 05:15:39)\r\n",
"xtp_run, version 2023-rc.2-dev gitid: 1a1ded7 (compiled Sep 29 2023, 05:17:09)\r\n",
"\r\n",
"Initializing calculator\r\n",
"... kmcmultiple\r\n",
Expand Down
Loading

0 comments on commit b9f4001

Please sign in to comment.