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experimental: support for power spectrum data #164
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Reviewer's Guide by SourceryThis pull request introduces support for the Whittle likelihood, enabling the analysis of power spectrum data. It includes a new likelihood function, a custom exponential distribution, and updates to data handling, simulation, and plotting functions to accommodate the new statistic. Updated class diagram for Statistic enumclassDiagram
class Statistic {
<<enumeration>>
chi2
cstat
pstat
pgstat
wstat
whittle
}
File-Level Changes
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Hey @wcxve - I've reviewed your changes - here's some feedback:
Overall Comments:
- Consider adding a short example demonstrating how to use the new
whittle
likelihood. - The
BetterExponential
class could be simplified by directly calculating the log probability instead of usingjnp.log
.
Here's what I looked at during the review
- 🟢 General issues: all looks good
- 🟢 Security: all looks good
- 🟢 Testing: all looks good
- 🟢 Complexity: all looks good
- 🟢 Documentation: all looks good
Help me be more useful! Please click 👍 or 👎 on each comment and I'll use the feedback to improve your reviews.
Summary by Sourcery
This pull request introduces support for power spectrum data analysis by implementing the Whittle likelihood function. It includes a custom exponential distribution (
BetterExponential
) and integrates the new likelihood into the existing inference and plotting framework. It also adds a check to ensure that the quantile residuals are finite.New Features:
Enhancements:
BetterExponential
distribution for improved handling of exponential distributions in the context of the Whittle likelihood.Tests: