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Add std to MLEFlux, MLELumin, and MLEEiso #169

Merged
merged 2 commits into from
Feb 25, 2025
Merged

Add std to MLEFlux, MLELumin, and MLEEiso #169

merged 2 commits into from
Feb 25, 2025

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wcxve
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@wcxve wcxve commented Feb 25, 2025

Summary by Sourcery

New Features:

  • Adds the standard deviation to the MLEFlux, MLELumin, and MLEEiso named tuples.

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sourcery-ai bot commented Feb 25, 2025

Reviewer's Guide by Sourcery

This pull request adds the standard deviation ('std') as a property to the MLEFlux, MLELumin, and MLEEiso NamedTuples. The standard deviation is calculated using the Hessian matrix of the likelihood function.

Updated class diagram for MLEFlux

classDiagram
    class MLEFlux {
        <<NamedTuple>>
        mle: dict[str, Q] | dict[str, dict[str, Q]]
        std: dict[str, Q] | dict[str, dict[str, Q]]
        intervals: dict[str, tuple[Q, Q]] | dict[str, dict[str, tuple[Q, Q]]]
        errors: dict[str, tuple[Q, Q]] | dict[str, dict[str, tuple[Q, Q]]]
        cl: float
    }
    note for MLEFlux "Added 'std' field"
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Updated class diagram for MLELumin

classDiagram
    class MLELumin {
        <<NamedTuple>>
        mle: dict[str, Q] | dict[str, dict[str, Q]]
        std: dict[str, Q] | dict[str, dict[str, Q]]
        intervals: dict[str, tuple[Q, Q]] | dict[str, dict[str, tuple[Q, Q]]]
        errors: dict[str, tuple[Q, Q]] | dict[str, dict[str, tuple[Q, Q]]]
        cl: float
    }
    note for MLELumin "Added 'std' field"
Loading

Updated class diagram for MLEEiso

classDiagram
    class MLEEiso {
        <<NamedTuple>>
        cosmo: Cosmology
        mle: dict[str, Q] | dict[str, dict[str, Q]]
        std: dict[str, Q] | dict[str, dict[str, Q]]
        intervals: dict[str, tuple[Q, Q]] | dict[str, dict[str, tuple[Q, Q]]]
    }
    note for MLEEiso "Added 'std' field"
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File-Level Changes

Change Details Files
Add 'std' to MLEFlux, MLELumin, and MLEEiso NamedTuples.
  • Added 'std' property to MLEFlux NamedTuple.
  • Added 'std' property to MLELumin NamedTuple.
  • Added 'std' property to MLEEiso NamedTuple.
src/elisa/infer/results.py
Calculate and return the standard deviation of the model flux.
  • Calculated the covariance matrix using the Hessian method.
  • Calculated the standard deviation from the covariance matrix.
  • Added the standard deviation to the returned dictionary.
src/elisa/infer/results.py

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Hey @wcxve - I've reviewed your changes - here's some feedback:

Overall Comments:

  • Consider adding a unit test to verify the correctness of the calculated standard deviations.
  • It might be helpful to add a brief explanation of how the standard deviation is calculated (e.g., from the Hessian) in the docstring.
Here's what I looked at during the review
  • 🟢 General issues: all looks good
  • 🟢 Security: all looks good
  • 🟢 Testing: all looks good
  • 🟢 Complexity: all looks good
  • 🟢 Documentation: all looks good

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@wcxve wcxve changed the title Add std to MLEFlux, MLELumin, and MLEEiso Add std to MLEFlux, MLELumin, and MLEEiso Feb 25, 2025
@wcxve wcxve merged commit b19d74b into main Feb 25, 2025
14 checks passed
@wcxve wcxve deleted the flux-std branch February 25, 2025 11:28
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