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Alexander Pico edited this page Feb 1, 2014 · 12 revisions

Files to update by FTP

  • wpi/lib/css/
  • annotation.css
  • pathvisiojs.css
  • pathway-diagram.css
  • wpi/lib/js/ (see readme for updated list)
  • async.js
  • d3.min.js
  • es5-shim.js
  • jquery.min.js *careful, this can conflict with WP js functions
  • jquery-ui.min.js *needed??
  • jsonld.js
  • load-image.min.js
  • modernizr.js
  • pathvisio.min.js
  • Promise.js (in jsonld)
  • rgb-color.min.js
  • strcase.min.js
  • svg-pan-zoom.js
  • typeahead.min.js
  • uuid.js
  • xccessors-standard.js (in es5-shim)
  • wpi/extensions/PathwayViewer/img/
  • loading.gif
  • fitscreen_icon.png
  • imageNotAvailable.jpg
  • wpi/extensions/PathwayViewer/datasources.txt (temp until next release)

Files to edit

  • wpi/PathwayWidget.php
  • opacity: 0.5
  • css list
  • uncomment jquery script src??
  • comment out jsSrc Xref deps??
  • onload: "container" and new API args
  • pathwayImage div "left:15px;"
  • wpi/extensions/PathwayViewer/PathwayViewer.php
  • onload: "container" and new API args
  • css list
  • js list
  • wpi/extensions/PathwayViewer/pathwayviewer.js
  • the entire file has been rewritten; late changes include:
  • check for typeof img.get(0) != 'undefined'
  • check margin: 0 0 0 0
  • check padding: 3 6 30 3
  • Template:PathwayPage:Top - to accommodate new viewer
  • copy/paste from test3 or test2 over to main www site

Files to check

  • wpi/lib/js/pathvisio.min.js
  • check uris for "external-data" and fix (should be none, now)
  • check for "/src/img/" and fix "/wpi/extensions/PathwayViewer/img/"
  • PathwayWidget help page
  • check that the src uris go to the correct test or main site
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