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add code coverage

add code coverage #203

Triggered via push January 15, 2025 23:06
Status Failure
Total duration 4m 10s
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R-CMD-check.yaml

on: push
Matrix: R-CMD-check
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3 errors and 17 warnings
macOS-latest (release)
No such keg: /opt/homebrew/Cellar/[email protected]
ubuntu-latest (release)
No coverage reports found. Please make sure you're generating reports successfully.
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (4.3)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
macOS-latest (release)
pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf
macOS-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ubuntu-latest (4.0)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (3.2.0)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (3.5)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (4.2)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (3.6)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (devel)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (4.1)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (3.3)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (3.4)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (release)
Unexpected input(s) 'file', 'plugin', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest (3.2)
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest (3.2)
unable to access index for repository http://bioconductor.org/packages/3.2/bioc/src/contrib:
ubuntu-latest (3.2)
unable to access index for repository http://bioconductor.org/packages/3.2/data/annotation/src/contrib:
ubuntu-latest (3.2)
unable to access index for repository http://bioconductor.org/packages/3.2/data/experiment/src/contrib: