GENOMIC_TEST

Field	Required	Type	Description
genomic_test_id	Yes	integer	A unique identifier for each platform
care_site_id	Yes	integer	A foreign key to the site of primary care in the care_site table, where the details of the care site are stored
genomic_test_name	No	varchar(255)	Information about the name of platform using sequencing assigned by institution
genomic_test_version	No	varchar(50)	Information about the name of platform using sequencing maintained by institution
reference_genome	No	varchar(50)	Information about the Reference genome used to sequencing analysis
sequencing_device	No	varchar(50)	Sequencer machine information
library_preparation	No	varchar(50)	Information about the preparation method for the sequencing library
target_capture	No	varchar(50)	Information about the capture method of examined and targeted region
read_type	No	varchar(50)	Information about the method of sequence reading
read_length	No	integer	Information about the length of read
quality_control_tools	No	varchar(255)	Information about the tool used to control quality
total_reads	No	integer	Total count of reads involved in assembly
mean_target_coverage	No	float	Mean target coverage
per_target_base_cover_100x	No	float	Percentage of selected bases
alignment_tools	No	varchar(255)	Information about the name and version of the alignment tool
variant_calling_tools	No	varchar(255)	Information about the name and version of variant calling tool
chromosome_corrdinate	No	varchar(255)	Coordinated system for numbering the chromosomes
annotation_tools	No	varchar(255)	Information about the tool used for annotation
annotation_databases	No	varchar(255)	Information about the database for annotation