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correcting liting
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luissian committed Mar 11, 2024
1 parent 02a74c1 commit e07d34a
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Showing 2 changed files with 3 additions and 4 deletions.
1 change: 0 additions & 1 deletion taranis/allele_calling.py
Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,6 @@

# import numpy
from collections import OrderedDict
import pandas as pd
from pathlib import Path
from Bio import SeqIO

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6 changes: 3 additions & 3 deletions taranis/eval_cluster.py
Original file line number Diff line number Diff line change
Expand Up @@ -175,9 +175,9 @@ def evaluate_clusters(
"alleles_not_found"
]
if len(result_eval["alleles_not_in_cluster"]) > 0:
evaluation_alleles[cluster_id][
"alleles_not_in_cluster"
] = result_eval["alleles_not_in_cluster"]
evaluation_alleles[cluster_id]["alleles_not_in_cluster"] = (
result_eval["alleles_not_in_cluster"]
)
else:
evaluation_alleles[cluster_id]["result"] = "OK"
return self.summary(evaluation_alleles)

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