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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 890 451

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 222 75

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 272 137

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 38 32

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 82 58

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    HTML 188 88

Repositories

Showing 10 of 310 repositories
  • Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    OHDSI/Cyclops’s past year of commit activity
    C++ 38 32 19 1 Updated Nov 8, 2024
  • Ares Public

    A Research Exploration System

    OHDSI/Ares’s past year of commit activity
    Vue 12 Apache-2.0 6 39 3 Updated Nov 8, 2024
  • ConceptSetDiagnostics Public

    Package to assist with design diagnostics for concept set

    OHDSI/ConceptSetDiagnostics’s past year of commit activity
    R 0 1 1 0 Updated Nov 7, 2024
  • WebAPI Public

    OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications

    OHDSI/WebAPI’s past year of commit activity
    Java 130 Apache-2.0 169 132 (2 issues need help) 23 Updated Nov 7, 2024
  • OHDSI/OmopViewer’s past year of commit activity
    R 1 Apache-2.0 0 27 (1 issue needs help) 2 Updated Nov 7, 2024
  • ETL-LambdaBuilder Public

    CDM Builder leveraging AWS Lambda

    OHDSI/ETL-LambdaBuilder’s past year of commit activity
    C# 14 Apache-2.0 14 1 3 Updated Nov 7, 2024
  • TxPathways Public

    [under development] OHDSI tool to build treatment history of population and derive summary statistics of patterns of treatment

    OHDSI/TxPathways’s past year of commit activity
    R 0 Apache-2.0 2 2 1 Updated Nov 7, 2024
  • Themis Public

    Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data generation or quality certification, and debates.

    OHDSI/Themis’s past year of commit activity
    28 Apache-2.0 9 51 1 Updated Nov 7, 2024
  • PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    OHDSI/PatientLevelPrediction’s past year of commit activity
  • Arachne Public

    Arachne Data Node web application

    OHDSI/Arachne’s past year of commit activity
    TypeScript 1 Apache-2.0 1 9 0 Updated Nov 7, 2024

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