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feat: Common functions for interfacing with python-irodsclient #202

Merged
merged 31 commits into from
Dec 8, 2023
Merged

feat: Common functions for interfacing with python-irodsclient #202

merged 31 commits into from
Dec 8, 2023

Commits on Nov 7, 2023

  1. feat: Common functions for interfacing with python-irodsclient

    @sellth
    sellth committed Nov 7, 2023
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  2. fix tests

    @sellth
    sellth committed Nov 7, 2023
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  3. fix chksum test

    @sellth
    sellth committed Nov 7, 2023
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Commits on Nov 8, 2023

  1. move all basic irods logic into new class iRODSCommon

    @sellth
    sellth committed Nov 8, 2023
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  2. adapt tests to new class

    @sellth
    sellth committed Nov 8, 2023
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  3. iRODSTransfer is now a child of iRODSCommon

    @sellth
    sellth committed Nov 8, 2023
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  4. flake8

    @sellth
    sellth committed Nov 8, 2023
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  5. custom irods_env_path support; pass along kwargs

    @sellth
    sellth committed Nov 8, 2023
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  6. flake8

    @sellth
    sellth committed Nov 8, 2023
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  7. make internal variables private

    @sellth
    sellth committed Nov 8, 2023
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  8. cleanup

    @sellth
    sellth committed Nov 8, 2023
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Commits on Nov 9, 2023

  1. improved docstrings

    @sellth
    sellth committed Nov 9, 2023
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Commits on Nov 17, 2023

  1. TransferJob computes file size during init

    @sellth
    sellth committed Nov 17, 2023
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  2. flake8

    @sellth
    sellth committed Nov 17, 2023
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  3. using attrs import instead of attr shadow

    @sellth
    sellth committed Nov 17, 2023
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  4. show file counts in progress bar

    @sellth
    sellth committed Nov 17, 2023
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  5. add recursive put

    @sellth
    sellth committed Nov 17, 2023
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  6. use proper context manager

    @sellth
    sellth committed Nov 17, 2023
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Commits on Nov 23, 2023

  1. add sync mode; check for existing files on remote

    @sellth
    sellth committed Nov 23, 2023
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Commits on Nov 27, 2023

  1. do not clean up session too soon

    @sellth
    sellth committed Nov 27, 2023
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  2. prepare TransferJob to also handle gets

    @sellth
    sellth committed Nov 27, 2023
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  3. add get method

    @sellth
    sellth committed Nov 27, 2023
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Commits on Nov 28, 2023

  1. restructure session creation; check valid token every time

    @sellth
    sellth committed Nov 28, 2023
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  2. create irods sessions dynamically

    @sellth
    sellth committed Nov 28, 2023
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  3. also check for timed out session token

    @sellth
    sellth committed Nov 28, 2023
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  4. make session available as property

    @sellth
    sellth committed Nov 28, 2023
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  5. linting

    @sellth
    sellth committed Nov 28, 2023
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  6. remove irods session context manager and multiple sessions

    @sellth
    sellth committed Nov 28, 2023
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Commits on Dec 8, 2023

  1. improve logging during chksum

    @sellth
    sellth committed Dec 8, 2023
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  2. increase session timeout

    @sellth
    sellth committed Dec 8, 2023
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  3. better error handling

    @sellth
    sellth committed Dec 8, 2023
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