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update viloca ewm for amplicon
Test Docker image #47: Commit 1b78793 pushed by LaraFuhrmann
April 25, 2024 08:30 57s feature-benchmark
April 25, 2024 08:30 57s
remove isfile() tst
Test Docker image #46: Commit c3553eb pushed by LaraFuhrmann
April 23, 2024 13:51 52s feature-benchmark
April 23, 2024 13:51 52s
indel config
Test Docker image #45: Commit 3711f38 pushed by LaraFuhrmann
April 23, 2024 13:50 48s feature-benchmark
April 23, 2024 13:50 48s
fix indel ground truth and performance evaluationa
Test Docker image #44: Commit 27ef96e pushed by LaraFuhrmann
April 23, 2024 13:37 54s feature-benchmark
April 23, 2024 13:37 54s
typo
Test Docker image #43: Commit c16b366 pushed by LaraFuhrmann
April 19, 2024 08:20 5m 32s add_virus_configs
April 19, 2024 08:20 5m 32s
update method defintions as run on cluster
Test Docker image #42: Commit bbfe604 pushed by LaraFuhrmann
April 18, 2024 13:45 50s feature-benchmark
April 18, 2024 13:45 50s
[Add] README for global haplo benchmark study
Test Docker image #41: Commit 30e3121 pushed by LaraFuhrmann
April 15, 2024 16:08 5m 27s add_virus_configs
April 15, 2024 16:08 5m 27s
update conig_schema
Test Docker image #40: Commit c2a1e75 pushed by LaraFuhrmann
March 5, 2024 12:19 8m 42s add_viloca
March 5, 2024 12:19 8m 42s
update conig_schema
Test Docker image #39: Commit c0e4fd1 pushed by LaraFuhrmann
March 5, 2024 12:17 2m 6s add_viloca
March 5, 2024 12:17 2m 6s
add predicthaplo
Test Docker image #38: Commit 1fd3615 pushed by LaraFuhrmann
February 9, 2024 14:35 46s feature-benchmark
February 9, 2024 14:35 46s
fix file paths
Test Docker image #37: Commit d8a9772 pushed by LaraFuhrmann
February 6, 2024 15:46 24m 59s add_viloca
February 6, 2024 15:46 24m 59s
adding viloca to the workflow
Test Docker image #36: Commit 0688a2e pushed by LaraFuhrmann
February 5, 2024 16:03 23m 32s add_viloca
February 5, 2024 16:03 23m 32s
add polio config and resources
Test Docker image #35: Commit 6beafd4 pushed by LaraFuhrmann
February 5, 2024 12:47 24m 28s add_virus_configs
February 5, 2024 12:47 24m 28s
update method strainline
Test Docker image #34: Commit b73b696 pushed by LaraFuhrmann
January 9, 2024 12:15 55s feature-benchmark
January 9, 2024 12:15 55s
update method strainline
Test Docker image #33: Commit 428c5d5 pushed by LaraFuhrmann
January 9, 2024 12:02 47s feature-benchmark
January 9, 2024 12:02 47s
add method: strainline
Test Docker image #32: Commit ad4b459 pushed by LaraFuhrmann
January 9, 2024 09:11 46s feature-benchmark
January 9, 2024 09:11 46s
[local_haplo] add predicthaplo
Test Docker image #31: Commit 503ff8b pushed by LaraFuhrmann
January 3, 2024 11:12 55s feature-benchmark
January 3, 2024 11:12 55s
temporary workaround for snakemake 8's breaking changes
Test Docker image #30: Commit 25fd3a9 pushed by DrYak
December 27, 2023 19:58 23m 53s rubicon
December 27, 2023 19:58 23m 53s
temporary workaround for snakemake 8's breaking changes
Test Docker image #29: Commit 25fd3a9 pushed by DrYak
December 27, 2023 17:38 25m 49s fix_ont
December 27, 2023 17:38 25m 49s
API change in Ruamel >=0.15
Test Docker image #28: Commit 9a3e502 pushed by DrYak
December 26, 2023 22:54 41s fix_ont
December 26, 2023 22:54 41s
API change in Ruamel >=0.15
Test Docker image #27: Commit c023106 pushed by DrYak
December 18, 2023 22:10 23m 6s fix_ont
December 18, 2023 22:10 23m 6s
Secondary alignments confuse downstream
Test Docker image #26: Commit a13d4ec pushed by DrYak
December 18, 2023 18:10 25m 52s fix_ont
December 18, 2023 18:10 25m 52s
Secondary alignments confuse downstream
Test Docker image #25: Commit 841b2ec pushed by DrYak
December 18, 2023 17:05 23m 39s fix_ont
December 18, 2023 17:05 23m 39s
Fix wrong filtering for ONT
Test Docker image #24: Commit af119b6 pushed by DrYak
December 15, 2023 15:42 23m 40s rubicon
December 15, 2023 15:42 23m 40s
Fix wrong filtering for ONT
Test Docker image #23: Commit af119b6 pushed by DrYak
December 15, 2023 13:07 23m 59s fix_ont
December 15, 2023 13:07 23m 59s