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[MRG] add code to support skipping genomes by ident #255

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merged 6 commits into from
Dec 6, 2022
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@ctb ctb commented Dec 4, 2022

This is one way to fix the problem where GenBank genomes have been removed, which is causing problems - see #241.

The idea is that you add

skip_genomes:
- GCF_000020205.1

to your config file and it removes those from the gather results.

I'm not sure this is the right way to handle it but it does seem to be one easy way to do it, at least ;).

@ctb ctb marked this pull request as ready for review December 5, 2022 17:41
@ctb ctb changed the title [WIP] add code to support skipping genomes by ident [MRG] add code to support skipping genomes by ident Dec 6, 2022
@ctb ctb merged commit fc3dbeb into latest Dec 6, 2022
@ctb ctb deleted the add/skip_genomes branch December 6, 2022 14:09
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